Gene Tmel_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0623 
Symbol 
ID5298143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp665942 
End bp666445 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content29% 
IMG OID640768895 
ProductNUDIX hydrolase 
Protein accessionYP_001305872 
Protein GI150020518 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATTATT TAGATATGAT TAATAAATTA AGAAAAAATA ATAGGCAAAA AGAGGCAGTA 
ATATGTTATG CAGAGTTTAA AAATAAGATA TTGTTTATTT TAAGAAAAAA GGAACCGTTT 
GCTAATTGCT TGGTACCACC AGGTGGCAAA GTTGAAGTTG GAGAAAATGT TGAAGATGCC 
GTAAGAAGGG AATTTTTTGA AGAAACAGGT TTAGAGCTGA AAGATATTAA TTTGCGTATG 
GTAACAACAG AAATAGGGCC AGAAAACTAC AATTGGATTT TATTTATTTT TAGGGGAAAA 
GTTTCTACGG ATAAATTTGT AGAGAGTGAT GAAGGAAAGT TAAAGTGGAT AGAAATAGAA 
AAGTTAAATG ATGAAAATTT AACAGATATA GATAAACATC TTATTCCACA TATTTTTTCA 
GATGAACCTG TGAAGGTAGT GGAAATAGAA TATAATAAAA ACAAGAATTG GAAAATCTTA 
TCCGAATACA ACTTAATTTA TTGA
 
Protein sequence
MDYLDMINKL RKNNRQKEAV ICYAEFKNKI LFILRKKEPF ANCLVPPGGK VEVGENVEDA 
VRREFFEETG LELKDINLRM VTTEIGPENY NWILFIFRGK VSTDKFVESD EGKLKWIEIE 
KLNDENLTDI DKHLIPHIFS DEPVKVVEIE YNKNKNWKIL SEYNLIY