| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0547 |
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| Symbol | |
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| ID | 5296726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 582000 |
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| End bp | 582620 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640768808 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001305799 |
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| Protein GI | 150020445 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAATCT TGGTAACCGG TGCAAACAGG GGTATAGGAT TAGCATTGGT AAAAGAAGCC
AAAAAACGTG GTCATATGGT AATACAAACA ATGAGAAAAT CGATTAATAA AGCATATTAC
TTGGATTTAT CAGATTTAAA TTCAATTGAA AAGTTTGTAG ATGAACTACC TTTGGAAATA
GATGTTTTGA TTAACAACGC AGGGATATTG TACAAAGATA AATTTGGAAT ACTAAATTAT
GAAAATTTTT TAAATTCCTT TAAAGTAAAT ACACTTGGAG CACTATTTTT AACTGAGACA
CTGTATAAAA GAAACAAATT GAGAAAAAAA GTTATAAATA TAACTTCTAT ATTAGGTTCC
ATAGAATTAA CAAATAACAC TCCTAGTTTT TCATACTCCA TTTCAAAAGC TGCACTTAAT
ATGGTTACAA AACTTTTATC AACAAATTTA AAGGGAATTT CTGTTATTTC AGTCCATCCT
GGATGGGTAA GAACGGATAT GGGGGGAAAA GAAGCTCCAA TCTTTCCCGA AGAATCTGCA
AAAGGAATAC TTAACATAGC AGAACAAGTT GAAGATACAG GAACATTTAT AGATTATACG
GGAAAACTGC TTCCTTGGTA A
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| Protein sequence | MTILVTGANR GIGLALVKEA KKRGHMVIQT MRKSINKAYY LDLSDLNSIE KFVDELPLEI
DVLINNAGIL YKDKFGILNY ENFLNSFKVN TLGALFLTET LYKRNKLRKK VINITSILGS
IELTNNTPSF SYSISKAALN MVTKLLSTNL KGISVISVHP GWVRTDMGGK EAPIFPEESA
KGILNIAEQV EDTGTFIDYT GKLLPW
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