| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0476 |
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| Symbol | |
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| ID | 5298212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 502073 |
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| End bp | 503542 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640768737 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_001305728 |
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| Protein GI | 150020374 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.218102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATGCTC CTAGATATGT GCTTTTAATA ACGGCAAATA ACGAAACCGA TGCTGGTGCT
ATTGTTCAAC AACTTGAATC ATCAGGGATA CCTTACAAAG TTGAGGCAGG AAATAGGATA
TTAATTCCTT CTTCATATAA CGTATATGAA GTAAGAATGA AATTGGCTTC AAGTGGTATT
TTAGGAGCTT CTTCAAAAGG TTTTGAAATT TTGGATCAGA CAAGTTTTGG GGCTACAAGT
TTTGATAAAC AAGTAAATTA TCAAAGAGCT CTTCAAGGAG AACTTGAAAG AACAATAGCT
ACCATTAATG GAGTAAAGTA TGCAAGGGTT CATCTTACAC TCCCAAAGTA TACATATTAT
GTGCGTGGAG ATATGGCTGA AACAAGGGCA TCTGTGCAAC TTGTATTAGA ACCAGGGGCA
AGTTTATCAA AGGAACAAGT AAAAGGAATA ATTTATCTTC TTACTGGTGC TGTCGAAGGG
TTAAAACCTG AAAATGTTAA AGTTGTTGAC AACTTTGGTA GGGCGTTAAG CGACCTTGTT
AATTTTGATG AAAATACGTA TGCTGCAAGC ACAAAAGCAG AACTGAAAAT GCAACTTGAG
AGATACTATA GAAGTAAAAT TCAACCTGCT CTTGAAGCGG TCTTTGGTCT GGGAAAAGTT
GAAGTAATTA CCGATATAAA CTTAAACTGG CAAAAAACTG AAAAGACCAT AACTACTTAT
TCATCTCCAA AAGGAGGTTT TATTAGAAGC AAAGAAACAG AAAGTGAAAA ATCTACAACC
TTTCCCTCCG ATGGGGGACC TGTTGGAACA GAATCAAACA TTCCAACAAC TTATTATCAA
AGCCTTGAAA GTTCTAATTC CACACTTTAT GAGAAAAAAC ACGAGATAAC AAATTATGAA
TTAAACCAAA TAGTGGAAAA TATCGTGCAA AATACAGAAG GTGAAATTGA AAATATATCT
GTATCGGTTA TAATAGATTC TTCATCTACA GTATTTAATA AAGTATCAAA AAATGAAATC
AATAAAATGG TAGCAGATGT TATACAAAAA AGCATAGCAG CAAATGCAAG CCCTTCTAAT
ATTTCCTACT CCCTTGCATT TATACCATTC AGTAGAGAAC TCGAAGAACA ATACCAAAAA
CTTATACAAT CAGAACAAAC AAAAAAAGAC ATAATTTTTA AAATTAGTCT TCTTTTAATT
GCCACTGTTT TAATGTTCTT TAGCTCATAT GGAATATTAC TACAAATTAG AAAGTCAAAA
GCAAGAAAAC TTGTATTGCA AAGGTATAAA ATGTTAGAAG AAGAAGCACG TAAATTAGTT
GAAAAAGAAG GGCAAGAAGA AGCTGAAGAA ATATTGAGTG AAGCACAAAA GGTTATAGAA
GAGTTAAAAA ATTACGCTCA ACAACTTGCT GTAAAATCCC CAGAGGAAAC TGCGGCAATA
ATAAAGATAT GGCTTTCTGA AAGAGGGTGA
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| Protein sequence | MNAPRYVLLI TANNETDAGA IVQQLESSGI PYKVEAGNRI LIPSSYNVYE VRMKLASSGI
LGASSKGFEI LDQTSFGATS FDKQVNYQRA LQGELERTIA TINGVKYARV HLTLPKYTYY
VRGDMAETRA SVQLVLEPGA SLSKEQVKGI IYLLTGAVEG LKPENVKVVD NFGRALSDLV
NFDENTYAAS TKAELKMQLE RYYRSKIQPA LEAVFGLGKV EVITDINLNW QKTEKTITTY
SSPKGGFIRS KETESEKSTT FPSDGGPVGT ESNIPTTYYQ SLESSNSTLY EKKHEITNYE
LNQIVENIVQ NTEGEIENIS VSVIIDSSST VFNKVSKNEI NKMVADVIQK SIAANASPSN
ISYSLAFIPF SRELEEQYQK LIQSEQTKKD IIFKISLLLI ATVLMFFSSY GILLQIRKSK
ARKLVLQRYK MLEEEARKLV EKEGQEEAEE ILSEAQKVIE ELKNYAQQLA VKSPEETAAI
IKIWLSERG
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