Gene Tmel_0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0412 
Symbol 
ID5298002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp434504 
End bp435082 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content30% 
IMG OID640768674 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001305665 
Protein GI150020311 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTA AATTGTACAA AACATCTGGA TTTTTAGGGA CGAATACTTA TGTTTTCAAA 
AAAGAAAGAA TTTATGTTGT GGATCCAGGT TTTGGAATAG GTAGGTATTT AGGTGATATA
CCCGTTTGTG TGCTTTTAAC TCACGGGCAC TATGATCATA TTGCTGGTCT TACAGAACTT
AATGTGGAAA AAGTTTATAT TTCTAAAGAA GATAAGAAAA TGTTGTATGA TCCAAATGAG
AATTTTTCTC ATCTTTTTGG GACAACGTTT ATATATGAGA AAGATGCAGA AGATATTGAT
GTTTTCTTTG AAACAATAAA GGTTCCTGGG CATACTTTGG GGTCTAGGAT AATTATATTC
GAAGATTTAA TATTTACAGG AGACACTGTA TTTTGCAATA CAGTAGGGAG AAGCGATTTG
GGTGGGTCAA AAAAATTGAT GAATGAAGCA ATTAAAAGAT TAAACGATGT ATTTTTAAAA
CTTAACAAAA ATATGTTTAT TTTACCAGGG CATGAAAAAG TGTGTAAAAT CTCAGATTTA
TTTAAAATAA ACCCTTTTTT TAAAAATGGA AATTACTAG
 
Protein sequence
MEFKLYKTSG FLGTNTYVFK KERIYVVDPG FGIGRYLGDI PVCVLLTHGH YDHIAGLTEL 
NVEKVYISKE DKKMLYDPNE NFSHLFGTTF IYEKDAEDID VFFETIKVPG HTLGSRIIIF
EDLIFTGDTV FCNTVGRSDL GGSKKLMNEA IKRLNDVFLK LNKNMFILPG HEKVCKISDL
FKINPFFKNG NY