Gene Tmel_0382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0382 
Symbol 
ID5296937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp397350 
End bp398447 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content31% 
IMG OID640768644 
ProductABC-2 type transporter 
Protein accessionYP_001305636 
Protein GI150020282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAT GGTATGAATT TAAAAGACTA ATAGGCAAGC CTCTAAATAT CATTCTCATA 
ATCCTCCTAC CAGTTGTTCT TACAATTGCC AGCATAATAT TCTTCAATGG ATTTGGGGTG
ACTAATGTAA AACTTGGGGT ATATAACCTT GATGACTCTC CTCTTTCTCA ATTTACAATA
AAGCTTGTTA TGTCATTTTT CAACGGTGGA ACACTAACCT ATGTAGATAA AAATTACACA
GAAAAGTTAC AAAGTGGTGA ATTAAATGCC GTGATGATTA TCCCAGAAAA CTTTACTGAT
GCCTTATATA ACGGCCAAAG AGTAGATATT GATTTTATAC CTAGTCCAGT AGATTTACAA
CTTTCCGTTG GAATTTACAA CGTTTTAAAT TCCATATTTA ACGATTTAAG TGGTTCACCT
TTTTTTAATC CTCAAGTTTT AAGATATTTA TTTGTAAGTC AAGAAACTCC CGCACCAAGA
TTTGTTCCAA AAACAAAAAA TTTCAAAACT GATTTTGGAA CGCTTTTTTC CCCCGCTATA
TTATTCTTAT CTGTTATTTT CCTGATCATC GCAATTGGTG TATTAACAAT AATAAATGAT
AGAGAATTGG GTTTAATAAA TATATTTAAG GTTAACAATG AAAAGTGGTA TAAATACACA
GTAGTAAAAT TTCTCGCATT ATTTTTTCTT GGGATTGTGG TTTCAATAGG TGTCTATGTG
GCAGGTATCA CGTTAAATAT AAAAATACCT TTTTCCATAT TTTTTCCATT GTCTTTAACT
GCAATAATTT TTCATAGCTC TTTGGCATTG CTTATTTCTA GTATTTCTCC AAATAAAGCA
ATGGCAAATA TAATTGGTAT TTCATTATCT ATGTTCTTTT TCTTTGCAAG TGGAAGTATT
ACACCTGTTA CAACACTTCC AAAACTTATG TTCAAGGTTG CTTCCTATAC TCCTTCGTAT
AAACTTACAT ATGCACTAAG GAACTACCAA CTAAACGGCA TACCAATAAA CTCTGAACTT
TTATACCTAA CTCTAATATC CGTAGTTTCT TTTTTGGTAA TGATGCTTAC TATAAAAAAA
GAGTTCAGGA TGAAATAA
 
Protein sequence
MRIWYEFKRL IGKPLNIILI ILLPVVLTIA SIIFFNGFGV TNVKLGVYNL DDSPLSQFTI 
KLVMSFFNGG TLTYVDKNYT EKLQSGELNA VMIIPENFTD ALYNGQRVDI DFIPSPVDLQ
LSVGIYNVLN SIFNDLSGSP FFNPQVLRYL FVSQETPAPR FVPKTKNFKT DFGTLFSPAI
LFLSVIFLII AIGVLTIIND RELGLINIFK VNNEKWYKYT VVKFLALFFL GIVVSIGVYV
AGITLNIKIP FSIFFPLSLT AIIFHSSLAL LISSISPNKA MANIIGISLS MFFFFASGSI
TPVTTLPKLM FKVASYTPSY KLTYALRNYQ LNGIPINSEL LYLTLISVVS FLVMMLTIKK
EFRMK