| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0367 |
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| Symbol | |
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| ID | 5297234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 380603 |
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| End bp | 384073 |
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| Gene Length | 3471 bp |
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| Protein Length | 1156 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 640768628 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001305621 |
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| Protein GI | 150020267 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAATA AAAATACAAC ACTTAATATT ATACTATATT ATTATGCTAT ATGGGGGGAT
TTTGTGTTTA AAATAGAACA ATGTTATTTT GATAACTCCA CAAATTTAAA CAATATTGTC
TTTGATAATT TTGAATACAG TAGTGCAATA GATAACTTTA AATTCTTTGC ATTAAAGACC
TACTTTCCAA GAAATAAATT TCGCGATGAA GACATAGAGT TTGAGGATAG GGTTTTTAGA
AATATTGTAT ATGAGTTCAA AAAAGGAAAT AAAGAAATCT CTGAAAAAAT GGCATCTGTG
TTTGTAAAAC TTTTAAAGAA TGTGAATGTA AAAAAACCTG TGATATGTGC TATTCCAGCA
TCTAATTTTG TTGATACAGA AAAAAGGTTT AAATATTTTA CAAAAACTCT TTCAAAAAAA
CTAAATTTTG AAAATGGCTT TTCCTACATC CAAAATAAAA AAAATAGAAG AAACAAACAC
TTTGAAAAAT TCCAAGGAAA TATTATAGAA TACATATCCA TCAACAAGAA AAAAATAAAA
GGCAAAACTA TACTACTTTT TGATGATATC ATAACAACTG GAAATAGTTT TATTACCATA
GCAAATAAGC TTGTTGAATT TGGAGCAGAA AATGTTATTG GTGTATTTTT AGGAAAAACA
TACGACTTTC AAACTAAGAA AAAAATACAA AAAAATACCT ATTATGATAA AGCAGCCTAT
ATTTTTGATG AAAGTATGAA AATAACAGGT TTTTCATATG AAATAAAAAC GTTTAATATA
TCAAAAAATA AAGTTGTGGA TAATAATTTT ATACTCACGG CAAAGATAGT TAATAACATA
ATAATGAGAG GAATTCCCAC ATTTGCCTCA AAATATCTTT TTGAAAACAC CAAAGATAAT
TATAAAGCCA TTCTTTCTGC ATGGTTGCAC AGGGTAATTA TATTTTCCAT AGTAAACGGT
ATACTAACCG AAGAAAACCT TAATATTGCG ATTATTGAAA GAGATATATC CTTTTCTCAT
ATTGCAATAA AGGATTTATA CTTATACATG GAAAATATAT CAAAACTTCT TGAATATACA
TTTCCTAAAT TCAATGTTAA AATTTTTAAT AATCCAGAAA ACAAATTCAA TAACTTTGAC
TTAGTTATTG ATATAGGCTT TAAAAAAAGG CAACCATTGA CAATAGGAGC ACCATACATA
TTCATCCAAC AAACTGAAAT GGATAATACA CTTCCAAGAT TTTACAACTT TAAACCGATA
AAATTTTTCA AAGCAAATGA AAGCAACAAA GAAAAAGAAA ATGCCCTAAA ATTTATTCTT
CAAAACGTAT TTTTTAAAGA AGAATTTAGA GAAGGCCAAC TTAAGATTAT AAAAAGAATT
CTTTCTCTAA ACGATACTAT TGGACTTTTA CCTACAGGTG GTGGGAAGTC TCTTTGCTAT
CAATTGAGCG GACTTTTACA ACCTGGAATA ATAATTGTAA TAGACCCTAT CAAATCACTT
ATGGTTGATC AAGTAGACAA TCTTGAAAAA TTGGGAATTA ATTCTTGTGC ATATCTAAAT
AGTGATCTTG AACGTTCAAA AAGAGATAAG ATACTAAAAA AGCTTGAAGA TGGAAATTAT
AAATTCTTAT TTATTGCTCC TGAAAGATTA CAAATAAAGG ATTTCAGAAA AAGTCTAAGT
GCACTTTCCG AAAAAACTAC TATTCCTTTT ATTGTAATAG ATGAAGCGCA TTGTGTTTCA
GAATGGGGTC ATGATTTTAG GCCTTCATAT TTAAACATTT CTAAAAATAT CAGACTTATT
ACACAAAAAA ATAATTACAA ACCAAAAATC TTAGCTCTAA CTGGGACCGC ATCATATGCG
GTATTAAACG ATATTCAAAA GGAATTGGAA ATCTTCTCTA ATAGTGCAAA AATATATCCC
AAGTCATTTG ATAGAAAAGA ACTTCATTTT ATAATCTACA AAACATCTAA TAAAGAAAAA
ATACTAAAAA AAATTCTCTT AACAAACCTT CCAAAAAAAT TTGGGAAAAA TAATATAGCA
GGAATTATCT TTTCATCAAC TGTAGATGGT GAAAACGGAA CGGAACATAT ATCCACAATT
TTAAAAAGTC TTGGCATTCA CCATTTAACA TATTCTGGAA AAGTGCCAAA AAAATCAAGG
TTAAGTGAAA AAGAACATGC CCAAAAGAAT TTAAAAACTC AAAAGAAGTT TAAAGAAAAT
AAGGTTTCTT TACTTGTTGC GACAAAGGCT TTTGGAATGG GTATTGACAA ACCAAATATA
AGATACACCA TACACTATAC ACTACCTTCG TCACTTGAAG CATTTTATCA GGAAGCAGGA
CGCGCAGGAA GAGATAGAAA CCCAGCATTT TGCTACCTTA TATTCACAGA AAAAGATGAA
AATATAACAA ATGCTGTATT GGATATTAGC AAAAGTGCAG ACTATGCTAT TAAATTATAT
AATGAACAAA TGAAAGATAT AAAAGATGAT GTAACAACGC AAGTATTTTT TCACAAATCT
TCATTTGTTG GTGAAAATGA AGAATCAGAG AAAGTGATTA ATTTTTTGGA AAAAGTTTTT
CCCACATTGC AAAAATATAA AAATGTGTAC ATAACAGTTT CACTAGAAGG AAGGAGTAAA
ATCATATTTG AAAAAATATT ACATAGGTTA AGCATTCTTG GTGTTGTTAA GGACTATACG
GTAAAGTACG ATACCCAAAT AACATTTGAA ATAAAAATGG AACTTTTATC CGAAAATAAC
GTATACAAAA ATTTATTTAA TTACGTTACA AGATACTCAT TAGGTGAAAA TGAGTTTAAA
GTGCAAAAAA GTCCATATAG TGATTTAAAG TCATCGTATA AGTTTTACAT AAAAACACTT
GTAAAGTTCA TCTATTCAGA GATTGAAAAA CAAAGACGAA GAGCACTTTT TGCCTTAATT
GAAATGGCAA GGCATGCAAA AGGCGAGAAT GAAATAAAAA AATATATACT AAATTATTTT
GAAGAAACCA CATTTTCAAG AGAGCTTTGG AAACTGTATA AAGAACTTGA TTTTGAAACT
TTGTTTAAAC TTTTAACGGT AATTCAAACA AAAAAAGTAG AAAAAATTAA AAATCTATAT
GGAAACATAT TAAGGTTTCT TGAAAGTGCC CCAGACAATC CAAGTTTTTA CCTATTAACA
GCCTTTATTC GAACCAGATT AATATATAGT CAAGACAGAG AAGAAGAAAT GATCGCAACG
GATGTAGAAA GTATAAAAAA AGATTGGGAA AACTTTTTGA GAAACTTTAA TTTCAAAAAA
TATGAAAATG AATTGATATT CATTTTCGAA AGATTTTTAG AAATTACTCA TCAAAGGACT
TTAAAAAATG AAATTTTTTA CCTCATTTTC GAAAAAACAA ACTCTAAAAA ATTTGTAGAA
AAATTTCAAT TTATAGATGA AACAAGATAT TTTTCCAAAA GAATACTTTA A
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| Protein sequence | MYNKNTTLNI ILYYYAIWGD FVFKIEQCYF DNSTNLNNIV FDNFEYSSAI DNFKFFALKT
YFPRNKFRDE DIEFEDRVFR NIVYEFKKGN KEISEKMASV FVKLLKNVNV KKPVICAIPA
SNFVDTEKRF KYFTKTLSKK LNFENGFSYI QNKKNRRNKH FEKFQGNIIE YISINKKKIK
GKTILLFDDI ITTGNSFITI ANKLVEFGAE NVIGVFLGKT YDFQTKKKIQ KNTYYDKAAY
IFDESMKITG FSYEIKTFNI SKNKVVDNNF ILTAKIVNNI IMRGIPTFAS KYLFENTKDN
YKAILSAWLH RVIIFSIVNG ILTEENLNIA IIERDISFSH IAIKDLYLYM ENISKLLEYT
FPKFNVKIFN NPENKFNNFD LVIDIGFKKR QPLTIGAPYI FIQQTEMDNT LPRFYNFKPI
KFFKANESNK EKENALKFIL QNVFFKEEFR EGQLKIIKRI LSLNDTIGLL PTGGGKSLCY
QLSGLLQPGI IIVIDPIKSL MVDQVDNLEK LGINSCAYLN SDLERSKRDK ILKKLEDGNY
KFLFIAPERL QIKDFRKSLS ALSEKTTIPF IVIDEAHCVS EWGHDFRPSY LNISKNIRLI
TQKNNYKPKI LALTGTASYA VLNDIQKELE IFSNSAKIYP KSFDRKELHF IIYKTSNKEK
ILKKILLTNL PKKFGKNNIA GIIFSSTVDG ENGTEHISTI LKSLGIHHLT YSGKVPKKSR
LSEKEHAQKN LKTQKKFKEN KVSLLVATKA FGMGIDKPNI RYTIHYTLPS SLEAFYQEAG
RAGRDRNPAF CYLIFTEKDE NITNAVLDIS KSADYAIKLY NEQMKDIKDD VTTQVFFHKS
SFVGENEESE KVINFLEKVF PTLQKYKNVY ITVSLEGRSK IIFEKILHRL SILGVVKDYT
VKYDTQITFE IKMELLSENN VYKNLFNYVT RYSLGENEFK VQKSPYSDLK SSYKFYIKTL
VKFIYSEIEK QRRRALFALI EMARHAKGEN EIKKYILNYF EETTFSRELW KLYKELDFET
LFKLLTVIQT KKVEKIKNLY GNILRFLESA PDNPSFYLLT AFIRTRLIYS QDREEEMIAT
DVESIKKDWE NFLRNFNFKK YENELIFIFE RFLEITHQRT LKNEIFYLIF EKTNSKKFVE
KFQFIDETRY FSKRIL
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