| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0246 |
|---|
| Symbol | |
|---|
| ID | 5296997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 249184 |
|---|
| End bp | 249411 |
|---|
| Gene Length | 228 bp |
|---|
| Protein Length | 75 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640768502 |
|---|
| Product | carbon storage regulator, CsrA |
|---|
| Protein accession | YP_001305505 |
|---|
| Protein GI | 150020151 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
|---|
| TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTGTAT TAGCTAGAAA AGTTGGTGAA AGTATATTTA TTGGTAATGA TGTAGAAGTT
AAAATTTTAA AGATAGATGG CGGAGAGGTA AAGATTGGTA TTTCTGCACC AAAGAGTGTA
AGAATCTTGC GAAAAGAGTT GTATGAAGAA ATTATGGCGG AGAATAAAAA AGCAATAGAG
TTTGATATAA AGGATATCTC GGAGGTGAGT AAATTTGAAA ATAGATGA
|
|---|
| Protein sequence | MLVLARKVGE SIFIGNDVEV KILKIDGGEV KIGISAPKSV RILRKELYEE IMAENKKAIE
FDIKDISEVS KFENR
|
|---|
| |