Gene Tmel_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0215 
Symbol 
ID5298443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand+ 
Start bp221029 
End bp221670 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content30% 
IMG OID640768471 
ProductDNA repair protein RadC 
Protein accessionYP_001305474 
Protein GI150020120 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTTCCAA GAGAAAAATT ATTAACTGAA GGTACGGAAA AATTAGAAAA CCATGAATTA 
TTAGCAATAT TATTGCGAAC TGGAACAAAA AATAATAATG TACTTGAAAT TTCAAAAAAA 
ATTCTAAACT ATTTTGACAA CAGCCTTTTA AAATTAAGCA AAGCAAGTAT AGAAGACTTG 
TGTAAAATAA AAGGACTGGG AAAAGCAAAA GCAACTACCA TACTTGCAGC TATGGAACTT 
TCGAAAAGAC TTCTAAACGA AGAAAGAAAA GGAAAAACAT TAAACTCTCC AGAGTTAATA 
TATGAATTCT GCAAGGATAT GAAACAATTT GATCAAGAAG TTGTTAGGGT TATAATGCTT 
AACTCAAAAT TATCAGTAAT ATCTTCAAGA GATATTACCA TTGGATTAAT TGACACAAGT 
CTTGCACACC CAAGAGAAGT ATTTAGAGAA GCTATCAAAA ATTCTGCTGT GTATATTGTA 
TTAGTACATA ACCACCCATC TGGAGATGTT ACACCAAGTA AAAATGACAA AGACTTAACC 
TACAAAGTAA AAGAAGCTGG TGAAATAATT GGAATTAAAC TACTAGATCA CGTAATTATT 
GGAAATGGTT TCTATAGTTT TAAACATAAC CGATTGATTT AA
 
Protein sequence
MLPREKLLTE GTEKLENHEL LAILLRTGTK NNNVLEISKK ILNYFDNSLL KLSKASIEDL 
CKIKGLGKAK ATTILAAMEL SKRLLNEERK GKTLNSPELI YEFCKDMKQF DQEVVRVIML 
NSKLSVISSR DITIGLIDTS LAHPREVFRE AIKNSAVYIV LVHNHPSGDV TPSKNDKDLT 
YKVKEAGEII GIKLLDHVII GNGFYSFKHN RLI