| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0208 |
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| Symbol | |
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| ID | 5298304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 216055 |
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| End bp | 217059 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640768464 |
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| Product | peptidase M42 family protein |
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| Protein accession | YP_001305467 |
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| Protein GI | 150020113 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1363] Cellulase M and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.53357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATT TAATTAGGAA ACTAACTGAA ACACATAGCC CAAGCGGAAG AGAAGATGAA
ATTAGAAAGG TAATTCTTTC CGAACTTGAT GGATTCATCG ATGGTTACAA AGTTGATAAA
TTGGGAAATT TAATTGTATG GAAAACCGGA AGAAGTGACA GAAAAATTCT CTTAGATGCA
CATATGGATG AAATTGGGGT TGTCGTAACA AATATTGACG ACAAAGGTTT TTTGAAAATT
GATATGGTTG GTGGAGTATC CCCTTATACT ATCTTCCGAT CTAAGATTAG ATTTGGAGAT
ATAATAGGTA TTGTTGACGT GGAAGGTGAA ACTGGAGCTA TACTTTCCGA AAATATTAAA
AACCTATCTT TTGACAAACT ATATGTAGAT ATTGGTGCAA AATCAAGGGA AGAAGCAGAA
AAACTATGTT CCATTGGAAC ATTTGGTACA TTTGATGGCT ACTTTGTAGA AAAAGGAGAC
TTTTATATAT CAAAATCCCT GGACGATAGA ATAGGATGCG CAGTCATAAT TGAAACATTC
AAAAGGCTAA AAAACCCCGA AAACACTGTT TACGGTGTTT TTGCGGTGCA AGAGGAAATT
GGAATTGTTG GTGCTAGAGT TGCTGGATAT GAAATTGATC CTGATGTAGC CATTGCAATT
GATGTTACCG GTGCTGGAGA TACTCCAAAG GCAAATAAAA GAATATCAAT GAAATTGGGA
AGTGGAGCTT GTATTAAAGT AAAAGACGGG TACTCAATTA GTGATAGAAA AATAGTTGAA
ACTTTAAGAA ATCTAGCTGA AAAGCACAAT ATACCATATC AAATGGAAGT GTTAATTTAC
GGTGGAACAG ATGCAAGAGG TTATCAAAAT ACAAAAGCAG GTATACCAAG TGCAACTATT
TCAATTGCGA CTAGGTATAT ACACACCCCA AATGAAATGG TTCACAAAAA TGATGTAGAA
GCAACAATAC AATTAATACT CAAATATATT GAGGAGGGAC TATAA
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| Protein sequence | MKDLIRKLTE THSPSGREDE IRKVILSELD GFIDGYKVDK LGNLIVWKTG RSDRKILLDA
HMDEIGVVVT NIDDKGFLKI DMVGGVSPYT IFRSKIRFGD IIGIVDVEGE TGAILSENIK
NLSFDKLYVD IGAKSREEAE KLCSIGTFGT FDGYFVEKGD FYISKSLDDR IGCAVIIETF
KRLKNPENTV YGVFAVQEEI GIVGARVAGY EIDPDVAIAI DVTGAGDTPK ANKRISMKLG
SGACIKVKDG YSISDRKIVE TLRNLAEKHN IPYQMEVLIY GGTDARGYQN TKAGIPSATI
SIATRYIHTP NEMVHKNDVE ATIQLILKYI EEGL
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