Gene Tmel_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0186 
Symbol 
ID5298447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp195482 
End bp196009 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content32% 
IMG OID640768443 
Producthypothetical protein 
Protein accessionYP_001305448 
Protein GI150020094 
COG category[S] Function unknown 
COG ID[COG1507] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATGCA CTGGTGATAA AGTTTTAAGA GAAATAGTTT CAAAACAAAT TGGTCGGGAT 
GCAAAAAACT TTTGTAAAGT TGCCGTATTT TGTTCTCATG GTTTTCCACA AGTGATAAAG
AGTCTTCCAG TTAGGGATGG AAAGCCATTT CCGACTTTAA ATTATCTTAC ATGTCCTTAT
TTAGTTAAAG AGGTGTCCAG ATTAGAAGAA AAAGGAATGA TAAAAGAAGT AGAGAAGATA
ATAGAAGAAG ATGAAGAGTT TAAAGAGAAA CTTTTTCAGG CACATAGGAA AGTTATAGAA
GAAAGAGATA GTTATTTTGA ATTAGATGAG ATTTCTGAAT TTAAGCAATG GAGAGAAAAA
TTAAAAAATG TGGGGACAGG TGGTATTTCA AACTTTTCAA AGGTAAAGTG TTTACATCTT
CACTTAGCTG ATTTTTTAGT GGGAATTAAA AATCCAGTGG GAAAGTTGGT TTATGAAAGG
TTAGGAGAGA TAGAGTGTAA AGATAAATAT TGTGAGGGAT TAAAGTGA
 
Protein sequence
MECTGDKVLR EIVSKQIGRD AKNFCKVAVF CSHGFPQVIK SLPVRDGKPF PTLNYLTCPY 
LVKEVSRLEE KGMIKEVEKI IEEDEEFKEK LFQAHRKVIE ERDSYFELDE ISEFKQWREK
LKNVGTGGIS NFSKVKCLHL HLADFLVGIK NPVGKLVYER LGEIECKDKY CEGLK