Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0177 |
Symbol | |
ID | 5298310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 188976 |
End bp | 190172 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640768434 |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_001305439 |
Protein GI | 150020085 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0162] Tyrosyl-tRNA synthetase |
TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000934164 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAACCTT CCAATCAGCT TGAGATTTTG AAAAGGAATG TAGTTGATTT TATATCTGAA GAAGAATTAT TAGAACGTTT AAAAGAAAAT AGACCTCTTA GAATAAAACT TGGTGTAGAT CCCTCAAGAC CGGATCTCCA TTTAGGGCAT GCTGTGGTTT TGAAAAAATT GAAAGAGTTT CAGGATTTAG GCCATCATGT TATTCTTATA ATTGGAGATT TTACTGGTAT GATTGGGGAT CCTACAGGTA GGAATATTAC AAGGCCTATG CTATCTGAGA AAGAAGTTAG AAAAAATGCC GAAACTTATG CAAAACAAGC TTTTAAAATA TTAGATGAGA GTAAGACGGA AGTTAGATTT AACAATGAAT GGCTTGGTAA AATGAAATTT GCGGATGTAG TGAGACTTGC TGGTAAATAC ACAGTTGCTA GAATGCTTGA AAGAGATGAT TTTTCTAAAA GGTTATCAGA AGGTCAACCT ATAAGTATAG CTGAATTTTT ATACCCTCTT GCTCAAGCAT ATGATTCAGT GGCAATAAAG GCAGATGTGG AATTAGGTGG AACAGATCAA TTGTTTAATT TGTTAGTTGG GAGAAAGGTA CAGGAAGAGT ACGGATTAAA ACCTCAAATT GTAATGACAA TGCCGATAAT TGAAGGTACT GATGGGAAAC TAAAAATGAG TAAGAGCTAT GATAACTATA TTGCATTTAC AGATGAACCA AACGATATGT ATGGAAAGGT AATGTCAATT CCTGATGAGC TTATAGTCAA GTATATGAGG TTGGTTACGG ATATTCCTGA AGAAGAAATA GTACGATATG AAAAGTTGAT AAAGGAGTCA AAGGTAAATC CAAGAGATGT CAAGATGAGG CTTGCAAGGG AAATTGTTAA GTTCTTTTAC AATGAGAATG CCGCAAAGGA AGCTGAAGAG AATTTTATTA AGGTATTTAG AAAAAAAGAA TTACCAGATG AAATGCCTGA AATAAAATTT GAAAATGGAA AATACAATAT TGTAGATGTG CTTGTTGCAG TGAAGGCAAC TCAAAGTAGA AGTGAAGCCA AAAGAGTAGT TAACCAAGGC GGAGTAAAGT TTGATGGAAA AAAAGTTGAA AGTTTTAAAG AAGATGTTAC AATCGAAAAT GAGCATGTTT TAAGGGTTGG AAAGAGAAAG TTCTATAAAT TGATTGCAAA AAATTGA
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Protein sequence | MEPSNQLEIL KRNVVDFISE EELLERLKEN RPLRIKLGVD PSRPDLHLGH AVVLKKLKEF QDLGHHVILI IGDFTGMIGD PTGRNITRPM LSEKEVRKNA ETYAKQAFKI LDESKTEVRF NNEWLGKMKF ADVVRLAGKY TVARMLERDD FSKRLSEGQP ISIAEFLYPL AQAYDSVAIK ADVELGGTDQ LFNLLVGRKV QEEYGLKPQI VMTMPIIEGT DGKLKMSKSY DNYIAFTDEP NDMYGKVMSI PDELIVKYMR LVTDIPEEEI VRYEKLIKES KVNPRDVKMR LAREIVKFFY NENAAKEAEE NFIKVFRKKE LPDEMPEIKF ENGKYNIVDV LVAVKATQSR SEAKRVVNQG GVKFDGKKVE SFKEDVTIEN EHVLRVGKRK FYKLIAKN
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