| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0127 |
|---|
| Symbol | |
|---|
| ID | 5297231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 132635 |
|---|
| End bp | 135001 |
|---|
| Gene Length | 2367 bp |
|---|
| Protein Length | 788 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640768384 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001305389 |
|---|
| Protein GI | 150020035 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTT TTAAAAATCT CTTAAATAAG TTGAAAGATT TTTTGGGAAA GCTAAAAGTT
GACAAATTAA TAGACATTTT GAAATCTATA TACAAAAGAA AGGTTCTTTT ATTCCTTTCA
GTAATAGTTG TTGTGATTGT TGTTTCTTTA TCAATTTTAT TAACTCAATT TCTGAAGAAT
AAATCTCAAA TTGAGATTAA TTCTCAACAA GAAATGACAA TTGTTAAAAA TTTATACATT
AACATACCTA AAGGGGCATT TCCATATGAG AAATCTTTCA ATTTAAATCC TCTAACCCCG
GAAACAGCTC CGACATTATT TGAGAATGCT CCGTTTATCG ATACGGTGTA TGATGTTATT
CCAAAAGACG GAAAAAAAGA TTTTGCGTAC ATTCCACTTA CGTTTAGGTA TTATTTTCCG
GCTGATTATT TTTATGGTAT AGATTACAAC AATGTAGCAC TTGCGTATAT TCCAGAAGAT
GGTTCGGCAT ATAGGATTTT TCCAGGAAGC TATATTGGTA AAGATGAAAA AGGATATTTT
GTTGAAGCAC AATCATTTCA CAGTTCAAAA GTGGGAATAG TTGCTCTAAA TCCAAAAAAA
CAAGAGTTGG GAATAAAGGT TTTGGTGGAA AAGTTGACGC CAAAACCTTC TATTTTGGTT
GTACCAGGTA CAGATAGAAA CTTTAAAGGG TATTTTAAAT CCGATGATAC TCCTGATTTA
AACTTTTGGT CTGTGGTTTT TTCTGATAGA ACGATAATGA TTTACAATTA TCCTCTATAC
GAAGTAAGAT CAAAGTTATA CAAAGACATG GTAGATGATT ATTTTAAACG TTCAGAATTG
AAAAGCTATA TTGAATTTGA GGCGGAAAGA TTGGCATCAG AGTTAAAAAG ATTTAAAAAT
TTTAAGTTTG ATATAGTTGC TCAAGATATT GGTGGGTTAA TAGTTGCATA TTGTTTAGTA
TTACATCCCG AAATTAGTAA TGTGAGGAAT ATAGCTTTTG TTTCTGTGCC GTTCAGAGGA
ACAAATGTGG CAAATCCTGT ATATTTTGGA TCACTTTTGT ATGGCAAATC TTCTGATGCA
CTTTCCAAGA TTTACAATTT AGATTCTAAT GTAATTTCTT CTTTGCAAAC TCATATATAT
ACATTTATAG AAACTATAAA CACATATTGG AGCGAAATTT TACCCGATTC AAAGGTGTTG
GAAAAGCTTG TAGATTTATC TAAGAAAAAT AATGTAAAAA TGGTATCTTT TATGGGAACC
AAACCTCCTT TTGGTGTTGA TGTAAAAGGT AGTACGCTTG AAAAATTTTA TCCTGAATTA
GTGAAAGGAA CAGGAGATGG TGTTGTTTCT GTAACCTCTG CCAAACTTAA AGATATGGAA
CTAGTTCAGA TAGATGGTGA TGCATATACA TTTTATTCTT CTAATGATTT TGTAGAAAAG
TTAAAACAAC TTTTTGAATT TGGTGAAATA AAAATTCCGG AGTATAAAGA TGATAATTAT
AGGGAATATG TTTCTAAGAC CGAAAAAGAA AAGGAAGTAT ATTTATCAAA GCTTAGACCG
TATAGATTTG ATGGAGCAAA AATATCGGAT TCAATAATTG TAGATTTTGA GAAAAAATTG
GATTTTCCTG GAAATCAGAT TGCCATCTTT AAATCAGTTA TTTATACAGG TGGTCCTGAT
GGGCTTTATG GTAATGGAAC GAAATTGTTA GAAGGGCCAA TATTTAACCT TAAGAGAAGT
TTTGGTGGAG TATCTTTTAG GACACCAAAT GAAATATACT TTTATAGCCC TGCGATAAAG
AAGAAGTATA ACGTTGTTTA TGTTACCGAT TTTCTTGCTA CCCAAGAGGG AGTATATACT
GCAAATAATG CAGGAGAAAT AGTTAGTTTT TGGGATCCTT CAGGAAATAA AATAATAGAT
TTAAAAGGGC AATATGGAAG AATAAAAGTT GTTGATAATT ATCTTATTAT GTTTACAAAC
AAACAAATTT ATATTCCCAA ACTTGAGTTA CTTTTAAATG TTCCAGAGTT TGAAAATAAA
GGTATAGATA TATCTGATGT AATTATTTAT AGAAATGAAG TATTAGCTGT TACAAGGAGT
TATGGATTTT TATTTTACGA TATAGGTTCA ACCACAGGGA ATTATATTGG AGAAGGATGG
ATTGGAAATA TTTCTATTAG TAGAGTAGGG AACTACTTAC TTACTGTAGG TAAGAACTTT
ATAACAATAA TAGATATACC TGAGAGAAGG GTTTTGAGAA TTATTGAAAA ACTTGATACG
GAAGTATTGT CAACTGAAGT AGATGATGAG TATCTTTATC TAGTAACAAA AACAGGAATT
TTGAAATATA AGGTAAAAAA AGATTAG
|
|---|
| Protein sequence | MNFFKNLLNK LKDFLGKLKV DKLIDILKSI YKRKVLLFLS VIVVVIVVSL SILLTQFLKN
KSQIEINSQQ EMTIVKNLYI NIPKGAFPYE KSFNLNPLTP ETAPTLFENA PFIDTVYDVI
PKDGKKDFAY IPLTFRYYFP ADYFYGIDYN NVALAYIPED GSAYRIFPGS YIGKDEKGYF
VEAQSFHSSK VGIVALNPKK QELGIKVLVE KLTPKPSILV VPGTDRNFKG YFKSDDTPDL
NFWSVVFSDR TIMIYNYPLY EVRSKLYKDM VDDYFKRSEL KSYIEFEAER LASELKRFKN
FKFDIVAQDI GGLIVAYCLV LHPEISNVRN IAFVSVPFRG TNVANPVYFG SLLYGKSSDA
LSKIYNLDSN VISSLQTHIY TFIETINTYW SEILPDSKVL EKLVDLSKKN NVKMVSFMGT
KPPFGVDVKG STLEKFYPEL VKGTGDGVVS VTSAKLKDME LVQIDGDAYT FYSSNDFVEK
LKQLFEFGEI KIPEYKDDNY REYVSKTEKE KEVYLSKLRP YRFDGAKISD SIIVDFEKKL
DFPGNQIAIF KSVIYTGGPD GLYGNGTKLL EGPIFNLKRS FGGVSFRTPN EIYFYSPAIK
KKYNVVYVTD FLATQEGVYT ANNAGEIVSF WDPSGNKIID LKGQYGRIKV VDNYLIMFTN
KQIYIPKLEL LLNVPEFENK GIDISDVIIY RNEVLAVTRS YGFLFYDIGS TTGNYIGEGW
IGNISISRVG NYLLTVGKNF ITIIDIPERR VLRIIEKLDT EVLSTEVDDE YLYLVTKTGI
LKYKVKKD
|
|---|
| |