Gene Tgr7_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_3279 
Symbol 
ID7315507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp3431198 
End bp3432163 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content68% 
IMG OID643618179 
Productdihydroorotate dehydrogenase 1 
Protein accessionYP_002515333 
Protein GI220936434 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCTG AGCATTCCCG GCGCGACCCG CTGGCCATCG ACTTCTGCGG TATGGATTTC 
GCCACGCCCC TGGTGCTGCT CTCCGGGTGC GTGGGATTCG GCGAGGAGTA TACCCGGGTG 
GCCGGTTTCT CCAACCGGGA CGTGGGCGCC GTGTGCCTGA AGGGCACCAC CGGCCAGGCG 
CGCCTGGGCA ACCTGCCCCA CCGGGTCTAC GAGACCCCCA TGGGCATGCT CAACGCCATC 
GGCCTGCAGA ACCCCGGCGT GGACAAGGTG GTGGACGAGA TCCTGCCCAC CCTGGACTTC 
GACGAGACCC GTTTCATCGC CAACGTCTCC GGCTCCACCA TCGAGGAATA CATCGCGGTG 
ACCCGGCGCT TCGACGACTC GCCGGTGGAC GCCATCGAGA TCAACATCTC CTGCCCCAAC 
GTGAAGGAGG GCGGCGTGGC CTTCGGCAAC GACCCGGACA TGTCCGCCCG GGTGGTGGAG 
GCCTGCCGCC AGGTGACGCA GAAGCCGCTC ATCACCAAGC TCTCCCCCAA CCAGACCGAC 
ATCGCCGAGA ACGCCCGGCG CTGCATCGAG GCGGGCACCG ACGCCTTCGC CGTGATCAAC 
ACCCTCATGG GCATGGCCAT CGACGCCGAG TCCCGGGAGG CGGTGATCGG CAACAACCAG 
GGCGGCCTGT CCGGACCGGC CATCAAGCCC ATCGCGCTGC TCAAGGTGCA CCAGGTCTAC 
CAGGTGGCGC GCCCCCACGG CGTGCCCATC ATCGGCCAGG GCGGCGTGAC CTCGCCCAGC 
GACGCGCTGG AATTCCTCAT CGCCGGCGCC AGCGCCGTGG GCGTGGGCAC GGCGCTGTTC 
TACGACCCGC TGATCTGCAA GAAGATCAAC CAGGGCATAC GGGACTACCT TGACCGCCAT 
GATCTGGCCA GCGTGGGCCA GCTCACCGGC AGCCTCACCC TGAACACCCC CCGGGCCTGC 
GGCTGA
 
Protein sequence
MTAEHSRRDP LAIDFCGMDF ATPLVLLSGC VGFGEEYTRV AGFSNRDVGA VCLKGTTGQA 
RLGNLPHRVY ETPMGMLNAI GLQNPGVDKV VDEILPTLDF DETRFIANVS GSTIEEYIAV 
TRRFDDSPVD AIEINISCPN VKEGGVAFGN DPDMSARVVE ACRQVTQKPL ITKLSPNQTD 
IAENARRCIE AGTDAFAVIN TLMGMAIDAE SREAVIGNNQ GGLSGPAIKP IALLKVHQVY 
QVARPHGVPI IGQGGVTSPS DALEFLIAGA SAVGVGTALF YDPLICKKIN QGIRDYLDRH 
DLASVGQLTG SLTLNTPRAC G