| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3273 |
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| Symbol | |
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| ID | 7315501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3425538 |
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| End bp | 3426440 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643618174 |
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| Product | MSHA biogenesis protein MshM |
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| Protein accession | YP_002515328 |
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| Protein GI | 220936429 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGCCA GTCACTTCGG TCTTCGGGAT GAACCCTTCC GGCTCACGCC GGACACGGCC
TTCTATTTCG ATTACCGGGC CCATCGGGAG GCGCTCAACG TACTCCTGCT GGCACTGCGC
GCCGGGGAGG GTTTCGTCAA GGTCACCGGC GAAGTGGGCA CGGGCAAGAC CCTCCTGTGC
CGCATGCTGA TGGAGGCCCT GGAGACGAGC CACGAGACCG CCTATCTGCC CAACCCCTGT
CTGACCGGCA ACGGACTGCG CGCCGCCCTG GCCCGGGAGT TGGGTCTGGA CCTGCCCCGC
AACCTGGGAC AGCACCGGGT GCTGGAGCGC ATCCAGGAAC ATCTGCTGCA CCTGGCCGCA
GCGGGTCGGC GGGTGGTGGT GCTGCTGGAC GAGGCGCAGG CCCTGCCCGA CGAGAGCCTG
GAGGCCCTGC GCCTGCTCAC CAACCTGGAA ACCGAGCGCC ACAAGCTGCT GCAGGTGGTG
CTGTTCGGGC AGCCTGAACT GGATGAACGC CTGGCCGGGT CACGGCTGCG CCAGTTGCGC
CAGCGCATCA GCTTCAGCCA CCGGCTCGAA CCCCTGGACC GTGCCGGCGT GACTCAGTAT
GTGCATCACC GCCTGGCCGT GGCGGGTGTG CCTGATCGAT CCCTGTTCGG CCGCAGGGCC
CTGGCGACCC TGCATCGGGC CTCCCGTGGC ATCCCTCGCC TGGTGAATAT CCTTGCCCAC
AAGGCACTGC TCGCCGCCTA CGGCGAGGGC GCGGCGCAGA TCAGCCCGGC ACATGTGCGT
CGCGCCGCGC TGGACACGGA GGATGCCCGC AGACCGGCAT CCCTGCGGGG CTGGGCCCTT
GCCGCCCTGG GCACCGTGGG TCTCGGGGCC GCCGCCGCAG CCCTGGGGGC CTGGCTGCCA
TGA
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| Protein sequence | MYASHFGLRD EPFRLTPDTA FYFDYRAHRE ALNVLLLALR AGEGFVKVTG EVGTGKTLLC
RMLMEALETS HETAYLPNPC LTGNGLRAAL ARELGLDLPR NLGQHRVLER IQEHLLHLAA
AGRRVVVLLD EAQALPDESL EALRLLTNLE TERHKLLQVV LFGQPELDER LAGSRLRQLR
QRISFSHRLE PLDRAGVTQY VHHRLAVAGV PDRSLFGRRA LATLHRASRG IPRLVNILAH
KALLAAYGEG AAQISPAHVR RAALDTEDAR RPASLRGWAL AALGTVGLGA AAAALGAWLP
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