| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3265 |
|---|
| Symbol | |
|---|
| ID | 7315493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 3418126 |
|---|
| End bp | 3418989 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643618166 |
|---|
| Product | type II secretory pathway pseudopilin PulG |
|---|
| Protein accession | YP_002515320 |
|---|
| Protein GI | 220936421 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.226057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAAGAG GCAAGAGGGA GGCCGGTTTG TCCTTCGCAC TTCCCAATTC GCCCTTCCCA
CTTCAAAGTG GTTTCACCCT GATCGAAATG ATCATGGTCA TCGTGCTGCT GGGTGCGCTG
GTGGCCGTGT CTTCGGTGTT CATCGTGCAG CCGTTTCGCG CCTTCGACGA CATGAAGCGG
CGGGCCGAAC TGGTGGAGGC GGCCGATTCG GCGCTGATGC TCATGACCCG AGAATTGCGT
GCGGCGCTGC CGAACAGTGT GCGTGTCCAG AGCGCCGGCG GGCGAACGGT TCTGGAGTTC
ATTCCCACTC TGTCGGGGGG ACGTTACCGC GCGACCCTGG CTGGGGATGG CAGCGGCGAT
ATCCTGGATT TCGGCAGCAC GGACACCGGC TTCGACGTGA TGGGTCCGCT GCCCTCGGCA
CCCGGACCGG GAAGCGCCGT GGTGATCTAC AACCTGACGG CTGTGGGCGG GCAGGGCAAC
GCCTATGCAA GCGACAACCG GGCGCCGGTG GATGCAGCGG GCAGCAGCAG CACCTATATC
GCCCTGGCAG CGGCACACCG GTTTCCATTC GCGTCTCCTG CCCAGCGTTT TCAGCTGGTG
TCTTCGCCCG TGAGTTATGT CTGTGATCCC GTCGCTGGCG TGTTGACCCG CCACCAGGGA
TACGGCTTTC AGAGCAGCCA GCCGGTGTCC AGCACCGAGC TGGGTGCCGG GGATACGGCA
GCGCGGTTTG TCGCGGGATG TGATATTCGC TTCGACCCCG GCGCGGGTAC GCGCAACGGT
TTGGTGTCGA TACGGCTGAG CCTCAGCGAG GCAGGGGAGA CGGTCTCCCT GTTGCAACAG
GTACACGTGC TGAACACACC ATGA
|
|---|
| Protein sequence | MTRGKREAGL SFALPNSPFP LQSGFTLIEM IMVIVLLGAL VAVSSVFIVQ PFRAFDDMKR
RAELVEAADS ALMLMTRELR AALPNSVRVQ SAGGRTVLEF IPTLSGGRYR ATLAGDGSGD
ILDFGSTDTG FDVMGPLPSA PGPGSAVVIY NLTAVGGQGN AYASDNRAPV DAAGSSSTYI
ALAAAHRFPF ASPAQRFQLV SSPVSYVCDP VAGVLTRHQG YGFQSSQPVS STELGAGDTA
ARFVAGCDIR FDPGAGTRNG LVSIRLSLSE AGETVSLLQQ VHVLNTP
|
|---|
| |