| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3019 |
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| Symbol | gltD |
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| ID | 7315947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 3158561 |
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| End bp | 3159967 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643617917 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_002515076 |
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| Protein GI | 220936177 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.117975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAACC CGATGCAGTT CCTCGAAATC CCCCGCCAGG ACCCGAAGAA GACCCCGGCG
CAGGTGCGCA TCCACGAGTT CAAGGAGATC TACGGGCAGT TTGACCCGGA GACCGCCAAG
CACCAGTCCG GCCGCTGCCT GGCCTGCGGC AACCCCTACT GCGAGTGGAA GTGCCCGGTC
CACAACTACA TCCCCAACTG GCTCAAGCTG GTGGCCGAAG GCAACCTGTT CGAGGCCGCG
GAGATGTCCC ACAAGACCAA CTCCCTGCCG GAGATCTGCG GCCGCGTCTG CCCCCAGGAC
CGCCTGTGCG AGGGCGCCTG CACCCTCAAT GACGGCTTCG GCGCCGTCAC CATCGGCTCC
ATCGAAAAAT ACATCACCGA CGAGGCCCTG AAGGCCGGCT GGCGCCCGGA CCTGTCCGGC
GTGGTGGCCA CCGGCAAGCG CGTGGCCATC GTGGGCGCGG GCCCGGCGGG CCTGGGTTGC
GCCGACGTGC TCACCCGCAA CGGCGTGGAG GCGGTGGTGT TCGACCGCTA CCCGGAGATC
GGCGGCCTGC TCACCTTCGG CATCCCTCCC TTCAAACTGG AAAAGGACGT GGTCAAGACC
CGCCGCCAGC TGATGGAGGA GATGGGCGTG AAGTTCCGGC TCAACACCGA GATCGGCCGC
GACGTCCCCT TCCAGCAGCT GCTGGACGAG TACGATGCCG TGTTCCTGGG CATGGGCACC
TACACCTACA TGAAGGGCGG TTTCCCCGGC GAGGACCTGC CCGGCGTGCA CGAGGCCCTG
CCCTTCCTGA TCTCCAACAT CAACCGGGAG ATGGGCTTCG AGCGCTCCGC CGACGAGTTC
ATCGACATGA AGGACCAGCG GGTGGTGGTG CTGGGCGGTG GCGACACCGC CATGGACTGC
AACCGCACCT CCGTGCGCCA GGGCGCCGCG AAGGTCACCT GCGCCTACCG CCGCGACGAG
GAGAACATGC CCGGTTCCCG CCGCGAGGTG GTCAATGCCA AGGAAGAGGG CGTGCAGTTC
CTGTGGAACC GCCAGCCGGT GGAGATCGTC GGCAACGGCC GCGTGGAAGG CGTCAAGGTG
GTCACCACCC AGCTGGGCGC GCCTGACGAG CGTGGCCGCC GCCGTCCCGA GCCTGTGCCC
GGCTCCGAGG AAGTGATCCC CGCCGACCGG GTGATCATCG CCTTCGGCTT CCGCCCAAGC
CCTTCCCCCT GGTTCGCCGA GTTCGGCATC ACTTTGGACG AGGGCGGCCG GGTCACGGCG
CCCGCCGACG GCAAGCATGC CTTCCAGACC GCCAATCCCA AGGTGTTCGC CGGCGGCGAC
ATGGTGCGCG GCTCCGACCT GGTGGTCACC GCCGTGTTCG AGGGTCGCCA GGCCGCGGAA
GGCATCCTGG ATTACCTTGG AGTGTAA
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| Protein sequence | MANPMQFLEI PRQDPKKTPA QVRIHEFKEI YGQFDPETAK HQSGRCLACG NPYCEWKCPV
HNYIPNWLKL VAEGNLFEAA EMSHKTNSLP EICGRVCPQD RLCEGACTLN DGFGAVTIGS
IEKYITDEAL KAGWRPDLSG VVATGKRVAI VGAGPAGLGC ADVLTRNGVE AVVFDRYPEI
GGLLTFGIPP FKLEKDVVKT RRQLMEEMGV KFRLNTEIGR DVPFQQLLDE YDAVFLGMGT
YTYMKGGFPG EDLPGVHEAL PFLISNINRE MGFERSADEF IDMKDQRVVV LGGGDTAMDC
NRTSVRQGAA KVTCAYRRDE ENMPGSRREV VNAKEEGVQF LWNRQPVEIV GNGRVEGVKV
VTTQLGAPDE RGRRRPEPVP GSEEVIPADR VIIAFGFRPS PSPWFAEFGI TLDEGGRVTA
PADGKHAFQT ANPKVFAGGD MVRGSDLVVT AVFEGRQAAE GILDYLGV
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