Gene Tgr7_2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2975 
Symbol 
ID7318272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp3114901 
End bp3115572 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content69% 
IMG OID643617874 
Productprotein of unknown function DUF1007 
Protein accessionYP_002515033 
Protein GI220936134 
COG category[R] General function prediction only 
COG ID[COG3683] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCAT TCGCCCTACA GCCCCTGCGC CGCCTGCTCA CAGGCCTCGT CCTGTTCCTC 
ACCGTCCTGC TGAGCGCTCA GGCCCACGCC CATCCCCACG CCTGGATCGA CCTGCGGGTG 
GCGGTGGTGT TCGACGAGAC AGGGCGCATC ACCGCCCTGC GCCAGGTCTG GCGCATCGAC 
CCCTTCTACA GCCTGGTGCT GCTGGAGGAG ATGGCCACCG ATGCCCGGGG CAACACACCG 
GAGGAAAAGC TCGCGGACAT CGGCAACCGC ATGATCGAGA ACCTCACCCC CTACCAGTAC 
TTCACCGAGG TGAGCCACGG CGGGCAGCGC CTGCAGGGTT TCACCGTCCG GGATCATGGC 
CTGGTCAACG CCGCCGGGCG CCTGGAACTG GGCTTTACCC TGGTGCTGCC CGAGCCGGTG 
AACCCGGAGA CCGGGCCGCT CAGCTACGCG GTGTTCGATC CCAGCTACTA CATCGAGATC 
CTCCACGACC CGGACGCCAC CGTGGCCCTG GAGGGCGCCT CTGAGCGTTG CGGCCTGCAG 
ATCAGACAGC CCCGGCCCGA TCCCGTGATC GTCGCCCGGG CCGCGGCCCT GGACGCCAAC 
CAGACCGGCG ACCCGGACCT GGGGCGCCAC TTCACCGAAC ACGGGGAGGT GCGATGCGAC 
CCGGCGCCCT GA
 
Protein sequence
MQPFALQPLR RLLTGLVLFL TVLLSAQAHA HPHAWIDLRV AVVFDETGRI TALRQVWRID 
PFYSLVLLEE MATDARGNTP EEKLADIGNR MIENLTPYQY FTEVSHGGQR LQGFTVRDHG 
LVNAAGRLEL GFTLVLPEPV NPETGPLSYA VFDPSYYIEI LHDPDATVAL EGASERCGLQ 
IRQPRPDPVI VARAAALDAN QTGDPDLGRH FTEHGEVRCD PAP