| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2804 |
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| Symbol | |
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| ID | 7317321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2943703 |
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| End bp | 2944869 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643617704 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002514864 |
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| Protein GI | 220935965 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.334081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCCA AAAATATCCG GCTCCTCTTT GGAGCAGCAC TGCTTGCCGC ACTTGGAGCG
GGCTTTGGCC TTGCCCAACT GATCCCCCAC ACGGAGCACG CTGCTCACGT CAAGGGCGAT
GATCACGATG ACCATGACGA CCACGATGAC GAGGCGCCCG AAGGTGTTGT CATCCTGACG
GCGCGACAAA TCGAGGCGTC AGGCATCGGT ATCGTCGCGG TGGGTCGTGG CGGCGGCAAC
GAGACTCGAC TGACGGGGCG GGTCGAATCC GCCCTGGACG CACGCACAGC GATCTCCGCC
ATCGTGGGCG GCCGAGTCGA GCAGGTACAG GTCGCACCCG GCTCTCCGGT TGAAGCGGGC
CAGACGCTGG TTGTGGTGAT CAGCGGCGAA GCCGCCACTC TGCGCGCCAA TGCCGAGGCC
GCGGCCGCCG AAGCGGAAGC CTCACGCCTG GAGTATCGAC GTGACTCGAA TCTGGTTGAA
CTGGGCGTGG TTGCCCGCCG GGAACTGGAA GCGTCCCGCG CCCGCTCACT GGCCGCCGAT
GCGGCAGCCA GGGCGGCACA GGCACAGGTG GTGGCAGCCG GCGCCCCCGA CGCACAGGGC
CGTGTCGCCA TCGTCAGCCC GATCGCGGGT GTTGTCGGCA CAGTCCAAGT CACGCCGGGC
GGATTCGTCG CTGCCGGTGG TGGCGTCGCG GAGGTCTCCA ATCCCGCGCA GACCGAACTC
GTCTTCACCG CGCCACCGGC CCTGGCGGCG CAGGTGATCT CCGGATCTCG CATCGAAGTC
AGAAGCCCCT CCGGCGATTT CGAAGCGGTG GTATTAGGGG TGGCCGCCAA TGTGCGTGAG
CAAGGCAATG CCACCCTCAT CCGGGCTCGT CCGGTTTCGG GCGTCCTGCC ACCCGCCGGC
TCGCCAGTGA CGGGGGTCAT TGTTACCGAT AGGCAGGAAG ATGGCCTGAC CGTCCCCGCC
GACGCGGTGC AAACGGTGGA CGGGCGATCG GTGGTGTTCG TCGCCACTGA CGAAGGCTTC
CGGGCAACGC CGGTGCTCGC TGGCCGTCAA GCTGGCGGCC ATATCGAGAT ACTGAACGGG
CTTGATGGCT CAGAGCGCAT CGTTGGGATC AACGCCTTCC TCTTAAAAGC CGAACTCGCC
AAAGGCGAGG CCGAACACAG CCACTGA
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| Protein sequence | MTPKNIRLLF GAALLAALGA GFGLAQLIPH TEHAAHVKGD DHDDHDDHDD EAPEGVVILT
ARQIEASGIG IVAVGRGGGN ETRLTGRVES ALDARTAISA IVGGRVEQVQ VAPGSPVEAG
QTLVVVISGE AATLRANAEA AAAEAEASRL EYRRDSNLVE LGVVARRELE ASRARSLAAD
AAARAAQAQV VAAGAPDAQG RVAIVSPIAG VVGTVQVTPG GFVAAGGGVA EVSNPAQTEL
VFTAPPALAA QVISGSRIEV RSPSGDFEAV VLGVAANVRE QGNATLIRAR PVSGVLPPAG
SPVTGVIVTD RQEDGLTVPA DAVQTVDGRS VVFVATDEGF RATPVLAGRQ AGGHIEILNG
LDGSERIVGI NAFLLKAELA KGEAEHSH
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