Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2375 |
Symbol | |
ID | 7318164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 2508106 |
End bp | 2509140 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643617273 |
Product | polysaccharide deacetylase |
Protein accession | YP_002514440 |
Protein GI | 220935541 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCGT CCCTCATCAA AGCCCGTATC AAACGAGCCG CCGCCGCCCT GCTCTACGGC ACGGGTCTGC TCTGGCTTCT AGCAAGCCGC CGCCTGAGAA ACCGGGCAGT CGTGTTGATG TACCACCGGG TCCTGCCCCG TGACGAGGCA AGCAAATCCT TCTCCCACCC GGGCATCGTC GTCACACCGG AGACCTTTGC ACGCCATCTG GACATCCTGA AACGCCATTT CCGACCACTG TCGCTCCCGG AATTCCTGTC ATACATGGAC TCGGGACAAG GCTTCCCACC CAAATCATGC CTGATCACCT TCGACGACGG CTGGGCGGAC AATCATCGCT ATGCCATGCC ACTGCTGCGT GAACGCGCTC TACCTGCCGT GGTCTTTGCC GCCACCGATT ACATCGGCAC CACCCGCACA TTCTGGCAGG AGCAACTCGG TCATCTGCTC TACGAGGCAA CCCGGCATGG CGTCGGTTCA GCCACCCTGG CTGCACGGGA GATCCACCTG GAACCATCCA GGGACGAGCA CACCCTGCGC ACAGACATTG CGCGCGTGGT TGACCGCTTC CGCAGAGAAA CCTACGACAA TATCCAGGCC CTCATGGCAG ACCTGAGCGA TGATCTTCGG GAAGGGGGAT TCGAGGATGC CCTGAGACCG CCCGACCGGT TCATGGACTG GCGACAACTG GGAGACTTGT CTGACAACGG TATCAGCATT GCTTCCCACA CCTGTTCACA CCGCATCCTC ACCCGTCTGG ACAGCACCGC CATGGGAAAA GAACTGGAGC AATCCAGGCG TCTGCTGGAA TCCCGCCTGG GCGGAGCCGT CGTTACAGTG GCCTATCCCA ATGGAGATTT CGATCCAACC GTGGAGGCGA CCACCAGGGC TTGCGGTTAT AAACTGGCAT TTACCACCCA ACCCGGATAT GCGTCAGCGG ACATGCCACC GCTGGTGCTG CCGCGCATGA ATATCCACGA GACGGCCACT GATACGAAAC CTTTATTTCT CTGTCGCACC CTGGGGATCC TTTAA
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Protein sequence | MTPSLIKARI KRAAAALLYG TGLLWLLASR RLRNRAVVLM YHRVLPRDEA SKSFSHPGIV VTPETFARHL DILKRHFRPL SLPEFLSYMD SGQGFPPKSC LITFDDGWAD NHRYAMPLLR ERALPAVVFA ATDYIGTTRT FWQEQLGHLL YEATRHGVGS ATLAAREIHL EPSRDEHTLR TDIARVVDRF RRETYDNIQA LMADLSDDLR EGGFEDALRP PDRFMDWRQL GDLSDNGISI ASHTCSHRIL TRLDSTAMGK ELEQSRRLLE SRLGGAVVTV AYPNGDFDPT VEATTRACGY KLAFTTQPGY ASADMPPLVL PRMNIHETAT DTKPLFLCRT LGIL
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