Gene Tgr7_2278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2278 
Symbol 
ID7317527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp2403906 
End bp2404439 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content66% 
IMG OID643617174 
Productrare lipoprotein B 
Protein accessionYP_002514345 
Protein GI220935446 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2980] Rare lipoprotein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAGA CAAGAGGCAA GTTGAACGGC GGGCACAGGG TGCCCCGCAT TTACTTGTCT 
CTTGCCACTT GTCTCTTGTC TCTGCTCCTT GCTTCCTGCG GCTTTCAACT GCGCGGCGCG
GCCGACCTGC CGCCGCAGAT GGAGCGTACC TGGCTCACCG GGATCAATGC CCATCACGGT
TTCGCCCGGG AACTGTCGGG CTTGCTGCGG GCCGGCGGCG TGACCCTGGT GGACAGCCGC
GAGGCGTCCA CCGCTGAATT CCGGGTGCAG CGACTCACCA CCGGTCGGCG CGTGCTGTCC
GTGGGTGGCG ATGCCCGGGT GAGCGAATAC GAACTCTACA TGGTGCTGGA ATACGAGGTG
CGCGGCCGCG GCAGCGAATG GGCCCTGGAG CCGGTGACGC TCAACATCAC CCGCGAATAC
GTGCACGACC CGCTGCTGGT GCTCAGCCAG GGCGAGCAGG AGCAGGCGCT GCGCGAGGCC
ATGGAGCGGG ACCTGGCCCA GCTGGTGATG TTCCGGCTGC AGTCGGCGCG TTGA
 
Protein sequence
MQETRGKLNG GHRVPRIYLS LATCLLSLLL ASCGFQLRGA ADLPPQMERT WLTGINAHHG 
FARELSGLLR AGGVTLVDSR EASTAEFRVQ RLTTGRRVLS VGGDARVSEY ELYMVLEYEV
RGRGSEWALE PVTLNITREY VHDPLLVLSQ GEQEQALREA MERDLAQLVM FRLQSAR