| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2010 |
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| Symbol | |
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| ID | 7316399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2133455 |
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| End bp | 2134261 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643616902 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_002514077 |
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| Protein GI | 220935178 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.154184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAC GACTGCAAAA ACTTCTGGCC CGTCTGGGTC ACGGCTCCCG ACGGGAGATC
GAACGCTGGA TCGAGGAAGG CCTCGTCACG GTGAATGGCA AGGTGGCCAG CCTGGGCGAC
CAGGCCGGCC CCGATGACAA GGTGGCCATT CGTGGCCGGG TGGTGCCCCT GGATGTGGCG
CCCAAGCCCC GGGTCATCGC CTACCACAAG CCCGATGGGG AGCTGACTAC CCGCAAGGAC
CCGGAAGGCC GTCCCACGGT GTTCGAGCAT CTGCCGCGAC TGCGCAACGG CCGCTGGATC
GCCGTGGGGA GACTGGACTA CAACACCTCG GGGCTGCTGC TGTTCACCAC CGACGGCGAA
CTGGCGGCAA AGCTCATGCA TCCCTCCGGC GAGGTGGAGC GCGAGTACGC CGTGCGCATC
CTGGGCGAGG TCTCTCCGGA CGCCCTGAAG CAGCTCACCA CCGGTGTGGA ACTGGAAGAC
GGCCCCGCCC GTTTCGAGAC CCTCAGGGAG GCCGGCGGCA CCGGCGCCAA CCGCTGGTAC
CACGTGACCC TGCGCGAGGG CCGCAACCGC GAGGTGCGCC GCCTCTGGGA AGCGGTGGGC
CTGACCGTGA GCCGGCTCAC CCGGGTGCGC TACGGACCCA TCAGCCTGGG CCGCGACCTG
CGCGCCGGGC GCTGGCGGGA TCTCGAGCCC GGCGAGATGG GTGCCCTCTA TGCAGTTGCG
GGTCTGCCCT GGACGCCGCC GAAGATCCGC CGCGAGGACC GCCGTCCGCC CAAGCCACCG
CGCACCGCCC GCCGTCCGAA ACGCTGA
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| Protein sequence | MTERLQKLLA RLGHGSRREI ERWIEEGLVT VNGKVASLGD QAGPDDKVAI RGRVVPLDVA
PKPRVIAYHK PDGELTTRKD PEGRPTVFEH LPRLRNGRWI AVGRLDYNTS GLLLFTTDGE
LAAKLMHPSG EVEREYAVRI LGEVSPDALK QLTTGVELED GPARFETLRE AGGTGANRWY
HVTLREGRNR EVRRLWEAVG LTVSRLTRVR YGPISLGRDL RAGRWRDLEP GEMGALYAVA
GLPWTPPKIR REDRRPPKPP RTARRPKR
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