| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1944 |
|---|
| Symbol | |
|---|
| ID | 7316333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2064696 |
|---|
| End bp | 2065238 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643616837 |
|---|
| Product | flavin reductase domain protein FMN-binding |
|---|
| Protein accession | YP_002514012 |
|---|
| Protein GI | 220935113 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.334773 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGATCGT TGAAACTGAG CAAGGCCTTC ACCCTCATCG AACCCGGCCC CGTTGTCCTG
GTCACCACCC ATGACGGGAA GCAGAACAAC ATCATGACCC TCTCCTGGAC CATGGTGATG
GACTTCACGC CCAGATTCGC CATCACCACG GGGCCCTGGA ACTATTCCTT CCGGGCGCTC
AAAAAGACCC GGGAGTGCGT GATCGCGATC CCCACCGTGG ACATGCTGGA CAAGGTGATC
GGCATCGGCA CCTGCTCCGG CGCGGATACG GACAAGTTCA CCCGGTTCGG GTTAACGCCG
GTGCCGGGGA GGGCGGTCAA GGCCCCCTTG ATCAAGGAAT GCCTGGCCAA CATCGAGTGC
AGGGTGATCG ACATCGTCAA AAAGCACGAC ATCGTGGTGC TGGAGGCCGT GGCGGCATAC
GTGGACACGT CTCGCAAGGA AAAGCGCACC GTGCACGCCG TGGGTGATGG GACCTTCATC
GTGGACGGCA GGACGCTGGA CCGCAGAAAG CTGATGTCAT CCAAGCTGCC TGCCGGTGTT
TAG
|
|---|
| Protein sequence | MRSLKLSKAF TLIEPGPVVL VTTHDGKQNN IMTLSWTMVM DFTPRFAITT GPWNYSFRAL
KKTRECVIAI PTVDMLDKVI GIGTCSGADT DKFTRFGLTP VPGRAVKAPL IKECLANIEC
RVIDIVKKHD IVVLEAVAAY VDTSRKEKRT VHAVGDGTFI VDGRTLDRRK LMSSKLPAGV
|
|---|
| |