Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1815 |
Symbol | |
ID | 7317625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1929885 |
End bp | 1930544 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643616706 |
Product | monofunctional biosynthetic peptidoglycan transglycosylase |
Protein accession | YP_002513883 |
Protein GI | 220934984 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.114997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCGTT TTCTGTTCAT CATCGCGCTG TTACCCGTCG CCTATTACCT GCTGTGCGTC GTGGCGCTGG CTTACCTGCG CTACCTGCCG CCACCCGTCA CAGGCGTGCA GACTCAACGG GTCATCGAGC AGGTATGGAG TGGCGAACCT GTCATCCGCG ACTATCGCTG GCGCCCCGCT TCCCAGATCT CCCCACACCT GCCCCGGGCC GTGGTGGCGG CCGAGGACGC CCGCTTCTTC CTGCACCGGG GTTTCGACTG GGAGGAGTTG CACAAGGCCC GGGAAACGGC CAGGGACGAA GGACAGTCCA TGCGCGGCGC CTCCACCCTC ACCCAGCAGC TGATCAAGAA CCTGTTCTTC ACCACCCACC GAAATCCGGT GCGCAAGGTC TACGAGTGGG CGCTGACCCC GGTTGCTGAG TTCATCCTGG GCAAGGACAG GATCCTGGAG CTGTACGTCA ACGTGGTGGA ATTCGGACCC GGCATCTACG GTGCTGAGGC GGCCGCGCGC CACCACTACG GCATCACCGC AGCCGACCTG TCCCGCCAGC AGGCCATGGG CCTCGCCGCG GTCCTCCCCG CGCCGCTGAC GCGCAGGCCC CAGGCCATGG GCTGGTATAC GGAGATCATC GAGGAGCGCA TGCAGCAGCT GGGGTGGTAG
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Protein sequence | MRRFLFIIAL LPVAYYLLCV VALAYLRYLP PPVTGVQTQR VIEQVWSGEP VIRDYRWRPA SQISPHLPRA VVAAEDARFF LHRGFDWEEL HKARETARDE GQSMRGASTL TQQLIKNLFF TTHRNPVRKV YEWALTPVAE FILGKDRILE LYVNVVEFGP GIYGAEAAAR HHYGITAADL SRQQAMGLAA VLPAPLTRRP QAMGWYTEII EERMQQLGW
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