| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1790 |
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| Symbol | |
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| ID | 7317600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1907886 |
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| End bp | 1909043 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643616682 |
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| Product | CRISPR-associated RAMP protein, Cmr1 family |
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| Protein accession | YP_002513859 |
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| Protein GI | 220934960 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1367] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01894] CRISPR-associated RAMP protein, Cmr1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0767565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCAGG GAACACACCA AATCGAGGCT AGCTATCAAA TCGTCACCCC CATGTTTCTG
GGTGATGGTG ACGCCAAACG GGTCGCCGAT GCGATTCGTC CTCCCTCTGT CAAGGGTGCC
CTGCGCTTCT GGTGGCGTGC CATGGCCTGG TCGCGCCTCT ATGATGGGAA TGAGGCCAGT
ACCCTGAAAA AAGTACACCG GGAAGAGGCG GCCCTGTTCG GTGCTGCGGC AGACGAAAAA
AGCGGCGGTC AGGGTAAGTT CCTGCTGCAG GTCGAATCAG ATGTCAAGAC GACAGGTCGC
CCGAATAATA TTGATTCCGG TCAAGCGTAT CTGCTTGGCC AGGGGCTTCA CCATTTCAGG
AACGGACCCA CGCGCGATGC ATTGATTTCC GGCTCATTCA CCCTGCGCCT GCGTCTGCGG
CCACGCGTAT CAGACGAGCA ACGCCGACAG TTGGCGGATA CCCTGTTGCT ATTCGGACTC
CTGGGGGGTC TCGGCAGCCG CAGTCGTCGA GGGTGGGGTT CGGTATCCAT CACGGATCTT
CAAGGCGATC ATGAAGGCCG TCAGACGCCT GCTGACCGTA ATACCTATTT CGACACGCTT
CGCAGTCTAC TCAATGGCAG TCAGGCGTAT CCCGGTATTC CGCCATATAG TGCCTTTTCT
ACGCAGACTC GAATCGATGT CAGTGACACC GATTCCTCGG CCACGGCATT GTTGTCTCGC
GCTGGTGAGG AAATGCAGCT CTTTCGCAGC TTCGGACGCA AGAACAAGGT CAATGGAAAA
AAGGCAGAGC AGAACTTCAG AGACGATCAC GATCTGATTT TCAGGGCGAT CAATCGAGAG
GAAAAGAGCA ATCAATTGCC CCGCCGCACT GTCTTCGGCC TGCCACACAA CTATTTCTTC
TCTTCGATCA AAAAGAAGAT GGACATAGCG CCCTCCGATG CGGGCCGCAC GCGCCGCGCG
TCGCCCTTGC TTGTGCACAT TCAAGCCCTG CCAAACGGTC AGTGCCTTCT GGTACAGACC
ATGATGATCG CTCGCTTTTT GCCTAAGGGT TCCAAAATCA ATCGGGGCAA GTTTCCGGTT
CCGGCCCCCG ATCCAGACTG GCAGGTACTT CACGCTTACA TGGACCGTTT TTCAATGAGT
GAGCCACTAT TCCCATGA
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| Protein sequence | MGQGTHQIEA SYQIVTPMFL GDGDAKRVAD AIRPPSVKGA LRFWWRAMAW SRLYDGNEAS
TLKKVHREEA ALFGAAADEK SGGQGKFLLQ VESDVKTTGR PNNIDSGQAY LLGQGLHHFR
NGPTRDALIS GSFTLRLRLR PRVSDEQRRQ LADTLLLFGL LGGLGSRSRR GWGSVSITDL
QGDHEGRQTP ADRNTYFDTL RSLLNGSQAY PGIPPYSAFS TQTRIDVSDT DSSATALLSR
AGEEMQLFRS FGRKNKVNGK KAEQNFRDDH DLIFRAINRE EKSNQLPRRT VFGLPHNYFF
SSIKKKMDIA PSDAGRTRRA SPLLVHIQAL PNGQCLLVQT MMIARFLPKG SKINRGKFPV
PAPDPDWQVL HAYMDRFSMS EPLFP
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