Gene Tgr7_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1600 
Symbol 
ID7316226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1716287 
End bp1717039 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content66% 
IMG OID643616492 
Productprotein of unknown function DUF81 
Protein accessionYP_002513670 
Protein GI220934771 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.280313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGG AACAGGCATT GCTGCTGCTC GCGGCAGGGG CCCTGTCGGG TTTCCTCAAC 
GTGATGAGCG CAGGCGGCTC CATGCTCACC CTGCCGGTGC TCATGTTCAT GGGCCTGGAC
AGCACCACCG CCAACGGCAC CAACCGGGTG GGCATCGTGC TGCAGAACAT CACCGCCACC
TGGAAGTACC GCAGCGCCGG GCACCGTCAC CTGCGCCTGG GTCTGAAGCT CTCGGTGCCG
GCCGTGCTGG GGGCCATCGT CGGGGCCTGG GTGGCCACCC TGGTGGGCGA GGACCTGTTC
CGCTGGATCC TGATCCTTGT GATGGTGGGC TCCTCGGTGC TCATGCTGCT GCCCATGCCG
GTGCACCGGG AGACCCTGTA CCTGGACGAG AGCCATCTGC GCTGGCCGGT GATCCTGGTC
ATGGCGGTGA TCGGCTTCTA CGGCGGCTTC ATCCAGGTGG CCGTGGGCAT CCTGTTCATC
GTCCTGCTCT ACCGCATCCT GCGCATCGAC CTGGTGCAGG TGAACATCCT CAAGGTGCTG
GTGGTGCTGA TCTACATGCT CCCTGCCCTG GGCATCTTCG TCGCCACCGG CAACGTGCAC
TGGGGCTTCG GCCTGGTGCT GGCCGTGGGC AGCATGGCCG GGGCCTGGCT GGCGGCCCAC
ATGACCCTGG GGCCTCGCGG GGCTGTGTGG ATCAAGCGCA TCACCCTGGC GATCATCGCG
GCGATCATCG TCAAGTTGTT GATGGACATG TGA
 
Protein sequence
MSLEQALLLL AAGALSGFLN VMSAGGSMLT LPVLMFMGLD STTANGTNRV GIVLQNITAT 
WKYRSAGHRH LRLGLKLSVP AVLGAIVGAW VATLVGEDLF RWILILVMVG SSVLMLLPMP
VHRETLYLDE SHLRWPVILV MAVIGFYGGF IQVAVGILFI VLLYRILRID LVQVNILKVL
VVLIYMLPAL GIFVATGNVH WGFGLVLAVG SMAGAWLAAH MTLGPRGAVW IKRITLAIIA
AIIVKLLMDM