| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1477 |
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| Symbol | |
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| ID | 7317963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1581001 |
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| End bp | 1582191 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643616368 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002513548 |
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| Protein GI | 220934649 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.153552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAAA AGATTCTCAT CGTTGTTGTG GCGCTGATCG TTGCCGGGCT CATCGCGCTG
GGCTTCAGGC CCACGCCGGT GCTGGTGGAC GTGGAGACCG TGACCCCGGG GCATCTGGCC
ATCACCGTCG AGGAGGAAGG CCGCACCCGG GTGATCGACC GCTACGAGGT CTCGGCGCCC
CTGACTGCCC AGGCCCGGCG TATCCACCTG CAGGTGGGTG ACGCGGTGCG ACTGGACGAT
GTACTGGTCA CCCTGGACGC CCCGGCCTCG CCTGCACTCG ATGCACGCAC CCTGCAGGAG
GCCCGTGCGC GCCTGGCCGC GGCGGAGGCC GCCCTGGAAA CCGCCCGGGC GGAAGTGCGC
GCCCTGGCGG CCCAGGCCCT GTTCGCCCGG GAGGAATTTG AACGCCTCAA GGGCCTGGCC
GAACAGCAGC TCATCTCCCG CAGCGCCCTG GACCGGGCCG CCACCGAACT TGATCAGGCC
GAGGCCCTGA CCCGCTCCGC ACGCTTTCGC GTGCAGACCG CCATCGCCCA GCGGGACGCC
GCCCAGGCTG TCCTCGCCCA CAGCAACGGC CAGGACCCCG ATGCCTTCGC CGTCCTGGAA
CTGAGATCCC CGGTGAACGG ACTCGTGCTG CGCCGCCATT TCGAGAGCGC CCGGGTGGTG
CAACCCGGCG AGCCGATCCT GGAGATCGGT GACCCCGGTC GTCTGGAGGT GGCCGTGGAT
GTGCTCTCCG CCGATGCGGT GCGCATCGAG CCGGGCATGC GGGTGATCTT CGAGCGCTGG
GGCGAGACCC GGGCGCTTGA GGGCCGGGTG CGTCGCGTCG AACCCACCGG GTTTACCAAG
ATTTCCGCCC TGGGGGTGGA GGAACAACGG GTCTGGGTCA TCGCCGACAT CACCTCGGCG
CACGAGGACT GGGCGAGGCT GGGCGACGGC TACCGGGTCA ATGCCCGCTT CGTGCTCTGG
GAGTCTGACG ACGTCCTGCG CGTGCCCACC AGCGCGCTGT TCCGCCATCA GGGAGACTGG
GCCGTGTTCG TCCTGGAGGA TGGCCGGGCC AGGCTGCGCA CGGTCGGTAT CGGGCGCCGT
GGCGCTATCC ACAGCGAGGC CGGCGCCGGT CTTGAGGCGG GCGAACGGGT GGTGGTGCAC
CCGGACCGAG ACATCAGCGA CGGCGTACGC CTGCGCCTGA GGGCTGAATG A
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| Protein sequence | MIKKILIVVV ALIVAGLIAL GFRPTPVLVD VETVTPGHLA ITVEEEGRTR VIDRYEVSAP
LTAQARRIHL QVGDAVRLDD VLVTLDAPAS PALDARTLQE ARARLAAAEA ALETARAEVR
ALAAQALFAR EEFERLKGLA EQQLISRSAL DRAATELDQA EALTRSARFR VQTAIAQRDA
AQAVLAHSNG QDPDAFAVLE LRSPVNGLVL RRHFESARVV QPGEPILEIG DPGRLEVAVD
VLSADAVRIE PGMRVIFERW GETRALEGRV RRVEPTGFTK ISALGVEEQR VWVIADITSA
HEDWARLGDG YRVNARFVLW ESDDVLRVPT SALFRHQGDW AVFVLEDGRA RLRTVGIGRR
GAIHSEAGAG LEAGERVVVH PDRDISDGVR LRLRAE
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