Gene Tgr7_1409 details

Gene Information

• Locus tag: Tgr7_1409
• ID: 7315118
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 1508613
• End bp: 1510568
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643616299
• Product: helicase c2
• Protein accession: YP_002513481
• Protein GI: 220934582
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1199] Rad3-related DNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCCCA ACGCCTCAGA GGTCCTGGGC CCCGACGGCC CCCTGGCCGA AACCCTGACG 
AACTTTCGCC CGCGCGCCGC CCAGCAGCAG ATGGCCGCGG CGGTGGAGCG TGCCCTGGAG 
GCGCGCCAGG CCCTGGTGGT GGAGGCGGGT ACCGGCGTGG GCAAGACCTT CGGCTACCTG 
GTGCCGGTGC TCATGGACGG CCGGCGCACC ATCCTCTCCA CCGGCACCAA AAACCTCCAG 
GACCAGCTGT TCCAGAAGGA TCTGCCCTTC GTGCGCGACG CGCTGGTCGG CGCGGGCCTC 
GGCCGGGTTC CCCGGGTTGC CCTGCTCAAG GGCCGCTCCA ATTATCTCTG TCGCCATCGC 
CTGGACCTGG CCCGGGAGGA CGGCCGGCTC GGTGCCGCGC AGACCGATCA GCTGCTGCGC 
GTGGTGCGCT GGGTCTCGCG CACCACGCGC GGTGATATCG GCGAACTCTC CGGCATCCCC 
GAGGATTCGC CCCTCTGGCC CCAGGTCACC TCCACCCCGG ACAACTGCCT GGGCCAGGAC 
TGTCCCGAGT ACGAGGACTG CTTCGTGGTG CGCGCCCGGC GCGAGGCCCA GGAGGCGGAC 
CTGGTGGTCA TCAACCACCA TCTGCTTATG GCGGACCTGA CCCTCAAGGA GGAGGGCTTC 
GGAGAGATCC TGCCCTCCGC CGATGCCTTC GTGCTGGACG AGGCCCACCA GCTGCCGGAC 
GTGGCCTCTG CCTTCTTCGG TCGTTCCGTG GGCAGTCGCC AGCTGCTGGA CCTGGCCCGG 
GACGCGGTGG CCGAACAGCT GCGCGAGGCC TCGGACATGG GCGACCTGCG CGATGCCGCC 
GATGCCCTGT CGATGGCGGT GGCCGCCCTG CGCAGCGAAC TGGGCGCGAC CAGCGGCCGC 
AGCCCCTGGA CCCGCCACGA GCAGGACGCC CGGATCACCG GGGCCATGGA CAGCCTGGTG 
GCGCGCCTGG AGACCCTGGT CATGTGGCTG GACACCGCCG CCGACCGGGG CAAGGGCCTG 
GAGCAGTGCG CCCGCCGGGC CAATACCCTG CGCGCCCGCC TGCTGGCCTT CATGAAGCCT 
GAGCCCGACA CCGTGCGCTG GGTGGAGACC TTCACCCGGG CCTTCGCCCT GCACGCGACG 
CCGCTCAACG TGGCCGAGCG TTTCGGCGAA CGCATGCGCG CCTATCCCAG CGCCTGGATC 
TTCGCCTCGG CGACGCTCTC CGTGGGCGGA CGCTTCGAGC ACTTCACCGG CCGCCTGGGC 
CTGGAGCAGG CCGAGACCCT GATGCTCGAC AGCCCCTTCG ACTACAGCCG CAACGCGCGC 
CTGTACCTGC CCGCCAACAT GCCCCAGCCC AACGCTCCGA ACCACACTGC CGCCGTGGTG 
GAGGCCGCAT TGCCGGTGAT CGAGGCCAAC CCCGGTGGTA CCTTCATGCT GTTCACCAGC 
CACCGCGCCC TGCGCGAGGC GGCACAACTG CTGGAAGGCC GCCTCGAGCG CGAACTGCTG 
GTGCAGGGCA CCGCCCCCCG GGACGAACTG CTGGCGCGCT TCCGCGCGGC CGGTGACGCG 
GTGCTGCTGG GCGCCCACAG TTTCTGGGAA GGGGTGGACG TGCGCGGCCG TGCGCTCTCC 
TGCGTGATCA TCGACAAGCT GCCCTTCGCC GCCCCCGACG ACCCGCTGCT GGAGGCCCGC 
CTGCAGGCCA TCCGCGACGC CGGCGGCAAT CCCTTCATGG ACTACCAGCT GCCCCAGGCG 
GTGCTCAGTC TCAAGCAGGG CGTCGGGCGC CTGATCCGCG ACGTCACCGA CCGGGGCGTG 
CTCATGCTCT GCGATCCGCG CATCCGCACC AAGGCCTACG GGCGGCTGTT CATCAGCAGC 
CTGCCGCCCA TCCCCAGACT GGACAACCTG GCCGAAGTGG CCAGTTTTCT GATGACCGAG 
GAACCCGAAT TCGACGAGGT TGCTGGCACC CTATGA 

 

Protein sequence

MNPNASEVLG PDGPLAETLT NFRPRAAQQQ MAAAVERALE ARQALVVEAG TGVGKTFGYL 
VPVLMDGRRT ILSTGTKNLQ DQLFQKDLPF VRDALVGAGL GRVPRVALLK GRSNYLCRHR 
LDLAREDGRL GAAQTDQLLR VVRWVSRTTR GDIGELSGIP EDSPLWPQVT STPDNCLGQD 
CPEYEDCFVV RARREAQEAD LVVINHHLLM ADLTLKEEGF GEILPSADAF VLDEAHQLPD 
VASAFFGRSV GSRQLLDLAR DAVAEQLREA SDMGDLRDAA DALSMAVAAL RSELGATSGR 
SPWTRHEQDA RITGAMDSLV ARLETLVMWL DTAADRGKGL EQCARRANTL RARLLAFMKP 
EPDTVRWVET FTRAFALHAT PLNVAERFGE RMRAYPSAWI FASATLSVGG RFEHFTGRLG 
LEQAETLMLD SPFDYSRNAR LYLPANMPQP NAPNHTAAVV EAALPVIEAN PGGTFMLFTS 
HRALREAAQL LEGRLERELL VQGTAPRDEL LARFRAAGDA VLLGAHSFWE GVDVRGRALS 
CVIIDKLPFA APDDPLLEAR LQAIRDAGGN PFMDYQLPQA VLSLKQGVGR LIRDVTDRGV 
LMLCDPRIRT KAYGRLFISS LPPIPRLDNL AEVASFLMTE EPEFDEVAGT L