| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1354 |
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| Symbol | |
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| ID | 7317846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1453422 |
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| End bp | 1454393 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616244 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002513426 |
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| Protein GI | 220934527 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.281487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAG CCGATTCCCC GCCCTCCAAA GTCACCCTGG TCCGGGTCGG ATCCGGTCAG
GCCGGCCAGC GCCTGGACAA TTTCCTGCTG GGGCAGCTCA AGGGGGTGCC CAAGAGCCAT
GTCTATCGCC TGCTGAGGAA GGGCGAGGTG CGGGTCAACA AGGGACGGGC GAAGCCCGAG
TACCGCCTCC AGGAAGGGGA CCAGGTGCGC ATCCCGCCGG TGCGCCAGGC CGCGAGCCCC
CCGGATGACA GCCAGATGCC CCTGCCCGGG GAGCTGGCCG AGACCCTGCG CCGGGCGGTG
CTGCTGGAGG ACGAGGACCT GCTGGTGCTC AACAAGCCGG CGGGGCTCGC GGTGCACGGT
GGCAGCGGCG TGAAACTGGG GCTCATCGAG GCCATGCGAC GCCTGCGGCC CCGGGCCGAT
TTCCTGGAAC TGGCCCACCG GCTGGACCGG GAGACCAGCG GTTGCCTGGT ACTGGCCAAG
CGCAGGGAGG CCCTGCTGGC CTTCCACGAG GCGCTCAAGT CCGGCGGGGT GGACAAGCAC
TACGTGACCC TGCTGGCCGG TGTCTGGCAG GGCGGCCCGC GCCGGATCTC CGAGACCCTG
GCCCGCAAGG GCCCCCGTAC CCAGGTGCGC AAGGTGGAGG TCGACGAGGA CGGCAAGCAC
GCCGAGAGCT TCTTCTTCCC GCGCCGGCAT TTCGTGGACG CCACCCTCAT GGGGGTTGAA
ATCGGCACCG GCCGCACCCA CCAGATCCGG GTGCACGCCG CCCACGAGGG CTTCCCCGTG
GCCGGCGACA GCCAGTACGG CGATTTCGAG TTCAACCGGC GCATGAAACG CCTGGGGCTC
AAGCGCCAGT TCCTGCACGC CGAGACCCTG AGGTTCCATC TGCCCGGCCA TGAACGTCCT
TACCAGATCC AGGCCCCCCT GCCGGCGGAC CTGGAGGCGG TGCTGGAACG GCTGGAGCCT
TTGGATGTCT GA
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| Protein sequence | MKTADSPPSK VTLVRVGSGQ AGQRLDNFLL GQLKGVPKSH VYRLLRKGEV RVNKGRAKPE
YRLQEGDQVR IPPVRQAASP PDDSQMPLPG ELAETLRRAV LLEDEDLLVL NKPAGLAVHG
GSGVKLGLIE AMRRLRPRAD FLELAHRLDR ETSGCLVLAK RREALLAFHE ALKSGGVDKH
YVTLLAGVWQ GGPRRISETL ARKGPRTQVR KVEVDEDGKH AESFFFPRRH FVDATLMGVE
IGTGRTHQIR VHAAHEGFPV AGDSQYGDFE FNRRMKRLGL KRQFLHAETL RFHLPGHERP
YQIQAPLPAD LEAVLERLEP LDV
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