Gene Tgr7_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1258 
Symbol 
ID7317747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1352264 
End bp1352752 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content65% 
IMG OID643616146 
ProductColicin V production protein 
Protein accessionYP_002513331 
Protein GI220934432 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTGGA TCGATTTCGT CATCATCGGG ATCATCGCCC TGTCGGCCCT GATCAGCCTG 
TTCCGGGGCT TCGTCAAGGA GGCGATCTCC CTGGCTACCT GGGTGGTGGC CTTCTGGGTC 
TCCCTGAGCT ACGCCAGTCC CCTGTCAGGT CTTCTGCCCG CGAGCCTCGA GGATCCCACC 
CTGCGGGTCG GCATCGCCTT CGCGGTGCTG TTCATCCTGA CCCTGATCCT GGGCGGCGTG 
ATCAACGTGC TGGCCGGGCA GATGGTCAAG CGCACCGGTC TTTCGGGCAC CGACCGCAGC 
CTGGGCGCGG TCTTCGGCAT GGCCCGGGGC CTGCTGGTGG TGGCGGTGCT GGTGCTGCTG 
GCGGCACTGA CTGTTCTGCC CCAGGAACCC TGGTGGAGTG ACAGCCTGCT GCTGCCCCAT 
TTCGAGCGCC TGGCCATCTG GCTGCGGGGA TTCCTCTCCG AGGATCTTGC CGCCCATTTC 
GTCTTCTAG
 
Protein sequence
MIWIDFVIIG IIALSALISL FRGFVKEAIS LATWVVAFWV SLSYASPLSG LLPASLEDPT 
LRVGIAFAVL FILTLILGGV INVLAGQMVK RTGLSGTDRS LGAVFGMARG LLVVAVLVLL 
AALTVLPQEP WWSDSLLLPH FERLAIWLRG FLSEDLAAHF VF