| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1100 |
|---|
| Symbol | |
|---|
| ID | 7315809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1185443 |
|---|
| End bp | 1186336 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643615987 |
|---|
| Product | cysteine synthase B |
|---|
| Protein accession | YP_002513173 |
|---|
| Protein GI | 220934274 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01138] cysteine synthase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCCT ATCCCACCCT GGAAGCCTTC GTCGGCAACA CCCCCCTGGT GCGCCTGCAG
CGTCTGCCGG GGCAGACGAC CAATACGATC CTGGCCAAGC TTGAAGGCAA TAACCCCGCC
GGCTCAGTGA AGGACCGCCC TGCGCTCAAC ATGATCCGCA AGGCGGAGGC GCGCGGCGAG
ATCCGCCCCG GGGACACCCT GATTGAGGCC ACCAGCGGCA ACACCGGCAT CGCCCTGGCC
ATGGCGGCGG CCATCAAGGG CTACCGCATG GTCCTCATTA TGCCGGAAAA CATGAGCGCG
GAACGCCGGG CCTCCATGAA GGCCTTCGGC GCCGAGATCA TCCTGGTGTC CCGGGAGCAG
AGCATGGAGG GGGCCCGGGA CCTGGCCAAG CAGATGGAGG CCGAGGGCAG GGGCCGGGTG
CTGGACCAGT TCTCCAACCC GGACAACCCC CTGGCCCACT ACGAGGGCAC CGGCCCGGAG
ATCTGGCGGG ATACCGGCGG TGAGGTGACC CATTTCGTCA GCGCCATGGG CACCACCGGC
ACCATCATGG GCACCTCCCG CTACCTCAAG GAGCAGAACC CGGCGGTACA GATCGTCGGC
GTGACCCCCG CCGAGGGCTC CAGCATCCCG GGCATCCGCC GCTGGCCGAA GGAATACCTG
CCCAGCATCT TCGAGGACTT CCGCGTGGAC CAGACCCTGG AGGTCTCCCA GGCCGAGGCC
GAGGACACCA TGCGCCGCCT GGCCGCCGAG GAGGGCATCT TCTGCGGGGT CTCCTCCGGG
GGTGCCGTGG CCGCCGCCCT GCGGCTGTCC GCCCAGGTGG AGAACGCCAC TATCGTGTCC
ATCATCTGCG ACCGGGGCGA CCGCTACATT TCCACCGGAG TATTCCCCGC ATGA
|
|---|
| Protein sequence | MKSYPTLEAF VGNTPLVRLQ RLPGQTTNTI LAKLEGNNPA GSVKDRPALN MIRKAEARGE
IRPGDTLIEA TSGNTGIALA MAAAIKGYRM VLIMPENMSA ERRASMKAFG AEIILVSREQ
SMEGARDLAK QMEAEGRGRV LDQFSNPDNP LAHYEGTGPE IWRDTGGEVT HFVSAMGTTG
TIMGTSRYLK EQNPAVQIVG VTPAEGSSIP GIRRWPKEYL PSIFEDFRVD QTLEVSQAEA
EDTMRRLAAE EGIFCGVSSG GAVAAALRLS AQVENATIVS IICDRGDRYI STGVFPA
|
|---|
| |