Gene Tgr7_1089 details

Gene Information

• Locus tag: Tgr7_1089
• ID: 7315798
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 1172542
• End bp: 1174356
• Gene Length: 1815 bp
• Protein Length: 604 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643615976
• Product: GTP-binding protein LepA
• Protein accession: YP_002513162
• Protein GI: 220934263
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0481] Membrane GTPase LepA
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01393] GTP-binding protein LepA

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.639247
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAAC CCAGACAAAA ATACATCCGC AACTTCTCCA TCATTGCCCA CATCGATCAC 
GGCAAGTCGA CCCTGGCGGA CCGCTTCATC CAGACCTGCG GAGGTCTCGA CGCGCGGGAG 
ATGTCCGAGC AGGTGCTGGA TTCCATGGAC CTGGAGCGCG AGCGCGGCAT CACCATCAAG 
GCCCAGAGTG TGTCCCTGGA CTACCACTCC CGCAGCGGCC AGGTCTACCA GCTGAATTTC 
ATCGACACCC CGGGGCACGT GGACTTCTCC TACGAGGTTT CCCGCTCCCT GGCCGCCTGC 
GAGGGCGCGC TGCTGGTGGT GGATGCCTCC CAGGGCGTCG AGGCCCAGAG CGTGGCCAAC 
TGCTACACCG CCATCGACCT GGACCTCGAA GTGCTGCCGG TGCTCAACAA GATCGACCTG 
CCCGCCGCCG ACCCGGAACG GGTGGCCGCG GAGATCGAGG AGATCATCGG CATCGAGGCC 
AAGGACGCGG TGCGGGTCAG CGCCAAGACC GGCCAGGGCG TGGACGACCT GCTGGAGGCC 
CTGGTGGGGC GCATCCCGGC GCCGGCCGGC GATCCGGACG CGCCCCTGCA GGCCCTGATC 
ATCGACTCCT GGTTCGACAA CTACCTGGGC GTGGTGGCCC TGGTACGGGT CATGAACGGC 
ACCGTGCGTG CCAAGCAGAA GATCATCGCC ATGTCCACGG GCCGCACCCA CCTGGTGGAC 
CGGGTGGGCG TGTTCACACC CAAGCCCAAG GACCGGGAGG AACTCGCCGC CGGCGACGTG 
GGTTTCGTGA TCGCCACCAT CAAGGACATC ACCGGGGCCA AGGTGGGCGA CACCCTCACC 
GGCGCCGACC GGCCCGCCGA GTCGCCACTG CCCGGCTTCA AGGACGTGCA GCCCCGGGTG 
TTCGCGGGCA TCTTCCCCAT CAGCGCGGAA GACTACAACG ACCTGCGCGA CGCCCTGGAC 
AAGCTCAAGC TCAACGACGC CTCCCTGCAC TATGAGCCGG AGACCTCCCA GGCCCTGGGC 
TTCGGTTTCC GCTGCGGCTT CCTGGGCATG CTGCACATGG AGATCATCCA GGAGCGCCTG 
GAGCGTGAAT ACGATCTGGA CCTGATCACC ACGGCGCCCA CCGTGGTCTA CCACGTGGAG 
ACCACCAAGG GTGAGGTGCT GGAGATCCAC AACCCCTCCC AGCTGCCGCC GATCAACGAG 
ATCAAGGAGA TCCGCGAGCC CATCATCCGC GCCAATGTCC TGGTGCCCCA GGACTACCTG 
GGCGCGGTGA TCAGCTTGTG CGTGGAAAAG CGCGGTGTGC AGACCCGCAT GCAGTACACC 
GGTCGGCAGG TGGGTCTCAC CTACGAGCTG CCCCTGTCCG AGGTGGTGCT GGACTTCTTC 
GACCGGCTCA AGTCCGTGAG CCGGGGCTAC GCCTCCTTCG ACTACGAGAT GGCGCGCATG 
GAACCGGCGC CCCTGGTGAA GGTGGACCTG CTCATCAACG GCGACCGTGT GGATGCGCTG 
TCCGTGATCG TGCACAAGGA CCAGGCCCAG AGCCGCGGCC GCCAGCTGGC CGAGACCATG 
AGCGAACTGA TCCCGCGGCA GATGTTCGAG GTGGCCATCC AGGCGGCCAT CGGCAGTCAC 
ATCATCGCGC GCACCAACGT GCGTGCGCTG CGCAAGAACG TCACCGCCAA GTGCTACGGC 
GGCGACGCCA CCCGCAAGCG CAAGCTGCTG GAAAAGCAGA AGGCGGGCAA GAAGCGCATG 
AAGCAGATCG GCCGTGTGGA AGTGCCCCAG GATGCCTTCC TGGCGGTGCT GCGCGCCGAC 
ACCAAGAGCA GCTAG 

 

Protein sequence

MAEPRQKYIR NFSIIAHIDH GKSTLADRFI QTCGGLDARE MSEQVLDSMD LERERGITIK 
AQSVSLDYHS RSGQVYQLNF IDTPGHVDFS YEVSRSLAAC EGALLVVDAS QGVEAQSVAN 
CYTAIDLDLE VLPVLNKIDL PAADPERVAA EIEEIIGIEA KDAVRVSAKT GQGVDDLLEA 
LVGRIPAPAG DPDAPLQALI IDSWFDNYLG VVALVRVMNG TVRAKQKIIA MSTGRTHLVD 
RVGVFTPKPK DREELAAGDV GFVIATIKDI TGAKVGDTLT GADRPAESPL PGFKDVQPRV 
FAGIFPISAE DYNDLRDALD KLKLNDASLH YEPETSQALG FGFRCGFLGM LHMEIIQERL 
EREYDLDLIT TAPTVVYHVE TTKGEVLEIH NPSQLPPINE IKEIREPIIR ANVLVPQDYL 
GAVISLCVEK RGVQTRMQYT GRQVGLTYEL PLSEVVLDFF DRLKSVSRGY ASFDYEMARM 
EPAPLVKVDL LINGDRVDAL SVIVHKDQAQ SRGRQLAETM SELIPRQMFE VAIQAAIGSH 
IIARTNVRAL RKNVTAKCYG GDATRKRKLL EKQKAGKKRM KQIGRVEVPQ DAFLAVLRAD 
TKSS