| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1085 |
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| Symbol | |
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| ID | 7315794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1169380 |
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| End bp | 1170354 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643615972 |
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| Product | sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_002513158 |
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| Protein GI | 220934259 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.254935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCTGC GGGGACTCTC CCGGTACGTC CTGGCCGTGG GGCTGCTGGC CTCCAGCCAC
GCCTGGGCCG ACGATCACCG GGCCGATGCG TTGCTGGATC GCATGATCGA GGCGGTCAGG
AGCCTCAGTT ACGAGGGCAC CTTCGTCTAC ATCCACGGGC AGAAGACCGA AACCATGCAG
ATCGTCCACA CCCGGGACGA GCGTGGCGAG CGCGAACGCC TGTTGTCCCT GACCGGCGAG
CCCCGTGAGG TGATCCGCGA CGAGGACGTG CTTACCTGCG TCTGGCCCGC CAGTCGTTCG
GTGGTGATCG AGCCCCGGCG CAGTCGACTC GGCGGACTGC CCGCCGCCAT CCCGGACCGT
AAGTTCGGTC CTGACTCTCC CTACCGCTTC CAGGTGGAAG GGGAGCAGCG CATCGCCGGC
CTGAGCTGCC GCACCCTGCA GATCATCCCC AACGACGATC TGCGCTACGG TCACCGCCTG
TGCATCAACG AGGACTCGGG CATGCTGCTC AAGTCCGAGA TGCTCGATCA CCAGGGCAAC
ACCATCGAGC AGTTCATGTT CACCAGCATC CAGTTCCCGG ATTACGTTCC CGACGACCGC
TTCATCCCGG TCATGAAGGG CGAGGGCTTC ACCACCCACC GGGTGGATGC CCAGAGCGAG
ATGAACCCGG ATCCGGGCTG GAGGGTGCGC GACATCCCCG ACGGTTTCCG GGTGGCCTCG
GTGAGCAAAC GTCCCATGGC CGCCAATCTC AACCCGGTCC AGCATCTGGT GCTGAGCGAC
GGGCTGGCCA CGGTGTCGGT GTTCATCTCC CGGGCCAGCA GTCTGGACGA CCTCTACATG
GGCGTGACCC AGTCCGGTGC CCTGCACGCC ATGGCGGTGC CCGCCGGCGA ATACCAGGTC
ACGGTGGTGG GCGAGGTGCC CGAGGCCACC ATCCGCATGA TCGCCGACTC CGTCTACCAC
GAGGCCAGAC CGTGA
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| Protein sequence | MGLRGLSRYV LAVGLLASSH AWADDHRADA LLDRMIEAVR SLSYEGTFVY IHGQKTETMQ
IVHTRDERGE RERLLSLTGE PREVIRDEDV LTCVWPASRS VVIEPRRSRL GGLPAAIPDR
KFGPDSPYRF QVEGEQRIAG LSCRTLQIIP NDDLRYGHRL CINEDSGMLL KSEMLDHQGN
TIEQFMFTSI QFPDYVPDDR FIPVMKGEGF TTHRVDAQSE MNPDPGWRVR DIPDGFRVAS
VSKRPMAANL NPVQHLVLSD GLATVSVFIS RASSLDDLYM GVTQSGALHA MAVPAGEYQV
TVVGEVPEAT IRMIADSVYH EARP
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