Gene Tgr7_1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1052 
Symbol 
ID7316630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1142161 
End bp1142844 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content69% 
IMG OID643615939 
Producthypothetical protein 
Protein accessionYP_002513126 
Protein GI220934227 
COG category[S] Function unknown 
COG ID[COG3650] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.710572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGGG TTCCGTCTGT TGTGCTGATC CTGGTGCTGC TTGCCGGGCT CACCGCCTGT 
CAGCGGTCGC CACACCAGGA TCCGTGGCGA GACGGTCCTA GTGTCCTGAG TCAGAGTTCT 
CTGACTCAGG ACACTCGCTA CCAGTGTGCC GAGCAACGGG TGGAGACCCG CCTGGGCGAG 
CATCGCATGC AGTTGCGCCT GCCCGAGCGG GACCTGGTGC TCGACGCGGT GGTGTCCGCC 
TCCGGCGCCC GCTACGAGGA TGCCGATGGC AACGGTTTCT GGAGCAAGGG GCCGAGCGAG 
GCCCTGCTGC GCCTTCAGGG TGGTGCCTGG GTGAACTGCG AAGTTACCGA GGCCCGCTCC 
CCCTGGGTGG CGGCCCGGGA CCGGGGCGTG GTCTACCGCG CAGTGGGCCA GGAGCCCGGC 
TGGGTGGTGG AAGTGTGGCC CGGCGAGGCC CCGGCCATCA TCCTGGTGAT GGATTACGGA 
CAGCGGCGCC TGGAGATCCC CCGCGCCCGT CGCCTGGAGG GTGACGCGGG CTATGCGGGG 
GAAGCTGGCG ATGTGGCGGT GAGCCTGCAC ATCCTGCGCG AGGCCTGCAC GGACGTGATG 
AGTGGCGAGG TCTTTCCCAC CCGGGCCGAG CTGCGGCTGG ACGGAAGCGT CTACCGGGGC 
TGCGGACATG AGCTGTCACC ATGA
 
Protein sequence
MNRVPSVVLI LVLLAGLTAC QRSPHQDPWR DGPSVLSQSS LTQDTRYQCA EQRVETRLGE 
HRMQLRLPER DLVLDAVVSA SGARYEDADG NGFWSKGPSE ALLRLQGGAW VNCEVTEARS 
PWVAARDRGV VYRAVGQEPG WVVEVWPGEA PAIILVMDYG QRRLEIPRAR RLEGDAGYAG 
EAGDVAVSLH ILREACTDVM SGEVFPTRAE LRLDGSVYRG CGHELSP