Gene Tgr7_1024 details

Gene Information

• Locus tag: Tgr7_1024
• ID: 7316601
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: -
• Start bp: 1111187
• End bp: 1111897
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643615910
• Product: exonuclease
• Protein accession: YP_002513098
• Protein GI: 220934199
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.747104
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTCC TGAGCACTCT GTTCGGCAAC CACCCCAACC TCGATCCGGG CATCGAGGAC 
CGCCTCGCCC GCTGGCGCGC CCTGCCGGAG CCCTCGGCCC GCACCAGCCT GGACGAGGCC 
CGCTTCGTGG TCATCGACGT GGAGACCACC GGTCTCGATC TCAGCCGCAG CGAGCTGCTG 
TCCGTGGGCC TGGTGCCGGT GGGCCCTCAT GGGATTGAAC TGGGCGGCCT GGACGAGATC 
GTGCTGCGCC GCGAGGTGAC CCGCATCGAC AAGGACAACC TGGTGGTGCA CGGCATCTCG 
CCCACGGAAT CCGCCGCCGG CGTGGACATC CACGAGGCCC TCTCCAGCGT GCTGGAGCGC 
ATCGGCAAGA CCTGGCTGGT GGCCTTCCAC GCCGACTTCG ATCGCATCAT CCTGGGCCGC 
ACCCTGCGCA AGCAGCTGGG CGTGAAGCTG CGCAACCCGT TCCTGGATCT GGCCATGCTG 
CTGCCCGCCC TCTACAGCGA GGGCACCGCA GGCCTCAAGG GCCTGGACGA CTGGCTCGGC 
CATTTCGCCA TCCCCTGCCC GGTGCGCCAC CGGGCCTCGG CGGATGCCCT GGTGACGGCG 
GAACTCCTGC TCCTGGCGCT GGCCGAGGCA CGACGCCAGA ACCATAACGA TCTCAGGGCC 
CTGGACGGGC TGGCGCAGAC CCAGGCGAAG CTGCACCTGA TGCGCCACTA A 

 

Protein sequence

MSFLSTLFGN HPNLDPGIED RLARWRALPE PSARTSLDEA RFVVIDVETT GLDLSRSELL 
SVGLVPVGPH GIELGGLDEI VLRREVTRID KDNLVVHGIS PTESAAGVDI HEALSSVLER 
IGKTWLVAFH ADFDRIILGR TLRKQLGVKL RNPFLDLAML LPALYSEGTA GLKGLDDWLG 
HFAIPCPVRH RASADALVTA ELLLLALAEA RRQNHNDLRA LDGLAQTQAK LHLMRH