| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0989 |
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| Symbol | |
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| ID | 7316560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1067944 |
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| End bp | 1069197 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643615875 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_002513064 |
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| Protein GI | 220934165 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.287966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGA TTCGCAATTA CACGCTGAAC TTCGGTCCCC AGCATCCCTC CGCCCACGGC
GTGCTGCGCC TGGTGCTGGA ACTGGACGGC GAGGTGGTGC AGCGCGCCGA CCCGCACATC
GGCCTGCTGC ATCGCGGCAC CGAGAAGCTG GCCGAGAGCA AGCCCTACAA CCAGAGCATC
GGCTACATGG ACCGTCTCGA CTACGTGTCC ATGATGTGCA ACGAGCACGG CTACGTGCTG
GCCATGGAAA AGCTCCTGGG TGTCCAGGCG CCCATCCGTG CCCAGTACAT CCGGGTGATG
TTCGACGAGA TTACCCGCAT CCTGAATCAC CTGCTGTGGC TCGGCGCCCA TGCCCTCGAC
ATCGGCGCCA TGACCGTGTT CCTGTACGCC TTCCGCGAGC GTGAGGACCT GATGGACTGC
TACGAGGCGG TGAGCGGCGC GCGCCTGCAC GCCACCTATT ACCGTCCCGG CGGCGTGGCC
CGTGACCTGC CGGGCAGCAT GCCCCAGTAC CAGGCCTCCC GCTTCAAGAG CCAGAAGGAA
GTGGACGCCC TCAACCAGGT GCGCCAGGGC TCCATGCTGG ATTTCATCGA GGCCTTCACC
GAGCGCTTCC CCGGCTGCGT GGATGAGTAC GAGACACTGC TCACCGACAA CCGCATCTGG
AAGCAGCGCA CCGTGGGCGT GGGTGTGGTC AGCCCCGAGC GCGCCATGCA GATGGGCTTC
ACCGGCCCCA TGCTGCGCGG CTCGGGTATC GAGTGGGACC TGCGCCGCAA GCAGCCCTAC
GAGGTCTACG ACCGGCTCGA CTTCCAGATC CCGGTGGGCG TGAACGGCGA CTGCTACGAC
CGCTACCTGG TGCGCATCGA GGAGATGCGC CAGTCCAACC GCATCATCAG GCAGTGCGTG
GACTGGCTGC GCAAGAACCC CGGCCCGGTG ATGCTGGAGG ATCACAAGAT CGCCCCGCCG
CGCCGCGAAG AGATGAAGGC GGACATGGAG TCCCTCATTC ACCACTTCAA GCTGTTCACC
GAGGGCTTCT GCCTGCCCGA GGGCGAGGCC TATGCCGCGG TGGAACATCC CAAGGGCGAG
TTCGGCGTGT ACCTGGTCTC CGACGGGGCC AACAAGCCCT ACCGGCTCAA GGTGCGCGCC
CCCGGATTTG CCCACCTGGC CGGCCTCAAC GAGATGGCCA CGGGCCACAT GCTGGCCGAC
GTGGTGGCCA TCATCGGCAC CCAGGACATC GTATTCGGGG AGATTGACCG CTGA
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| Protein sequence | MPEIRNYTLN FGPQHPSAHG VLRLVLELDG EVVQRADPHI GLLHRGTEKL AESKPYNQSI
GYMDRLDYVS MMCNEHGYVL AMEKLLGVQA PIRAQYIRVM FDEITRILNH LLWLGAHALD
IGAMTVFLYA FREREDLMDC YEAVSGARLH ATYYRPGGVA RDLPGSMPQY QASRFKSQKE
VDALNQVRQG SMLDFIEAFT ERFPGCVDEY ETLLTDNRIW KQRTVGVGVV SPERAMQMGF
TGPMLRGSGI EWDLRRKQPY EVYDRLDFQI PVGVNGDCYD RYLVRIEEMR QSNRIIRQCV
DWLRKNPGPV MLEDHKIAPP RREEMKADME SLIHHFKLFT EGFCLPEGEA YAAVEHPKGE
FGVYLVSDGA NKPYRLKVRA PGFAHLAGLN EMATGHMLAD VVAIIGTQDI VFGEIDR
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