Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0949 |
Symbol | |
ID | 7314980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1025254 |
End bp | 1026450 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643615834 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002513024 |
Protein GI | 220934125 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.410592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAGT CGCTCGCCAC CGCCAAGCCC GCCTCTCTCG CGCCCCGGCG CAGCTACAGC GCTCAGGTGT TGCGCGAGGT GTTCCTGCGC TGGGGTGCCC GGGTGGGGCT CGCCTGGATC CTGGTGCTGG TGGGCGTGTC GGTGTTCGCG CCCTTCATCG CCACCAGTCA TCCCCTGCTG CTCTCCGAGG GCGGGCGGCT CTTCAGCCCC GCCCTGCGCC ACCTGACGCC GGCGGACGTC ACCATCATGG CGGTGTTCCT GGCGGCGGTG GCGGTGCTGT TCTGGCGGGT GGCGTTCCGC AAGCGCCTGG CAGTGGTCCT TGGCGTGCTG GCGCTGAGCG CGACGCTCAG CTACAGCCTG ATCACGCCGC CCTCCCTGGT GATCTTCGAG CAGTACCGGG AGGCGGAGGC CGCCGGGCAG TATGACTGGG TGTGGCGTGC GCCGATTCCC TATTCCCCCA AGGACTACCT GCGTGATTTC GGCGACACCG GCCTCGAGGC CCCGCTCGAG AGTGCCGAGC GGCGCCACTG GCTGGGCACG GAGGAGAACG GCGCAGACGT GCTCTCACGC ATGATCCACG CCTCGCGCAT CGCCCTGGCC ATCGGCTTCA TCGCCACGGG CATCGCGCTC GGCATCGGCG TGATCATCGG CGGCCTGATG GGCTACTTCT CCGGCATCGT GGACATCATC GGCATGCGCC TGGTGGAGAT CTTCGAGGCC ATCCCCACGC TGTTCCTGCT GCTCACCTTC GTGGCCTTCT TCGGTCGCAG CCTGTACATG ATGATGATCA TCATCGGCAT CACCTCCTGG TCGGGCTATG CCCGCTACGT GCGCGCCGAA TTCCTCAAGC TGCGCCAGCA GGAATACGTA CAGGCGGCGG TGGCCTGCGG CCTGCCGCTG CGCTCCATCC TGTTCCGCCA CATGCTGCCC AACGGCGCCG CGCCCATCCT GGTGGCGGCA AGCTTCGGTG TGGCCTCCGC CATCCTCGCC GAGGCGACGC TGAGCTTCCT GGGCCTGGGC CTGGTGGACG ATCCCTCCTG GGGCCAGATG CTCAACCAGG CAGTGCAGTC CTCCACCTTC AACTGGTGGA TGGCGGCCTT CCCGGGCGGC GCCATCTTCC TCACGGTGTT CGCCTACAAC CTGGTGGGCG AATCCCTGCG CGACGCGCTG GATCCGCATT TGAAGAAGAG CATCTAA
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Protein sequence | MTESLATAKP ASLAPRRSYS AQVLREVFLR WGARVGLAWI LVLVGVSVFA PFIATSHPLL LSEGGRLFSP ALRHLTPADV TIMAVFLAAV AVLFWRVAFR KRLAVVLGVL ALSATLSYSL ITPPSLVIFE QYREAEAAGQ YDWVWRAPIP YSPKDYLRDF GDTGLEAPLE SAERRHWLGT EENGADVLSR MIHASRIALA IGFIATGIAL GIGVIIGGLM GYFSGIVDII GMRLVEIFEA IPTLFLLLTF VAFFGRSLYM MMIIIGITSW SGYARYVRAE FLKLRQQEYV QAAVACGLPL RSILFRHMLP NGAAPILVAA SFGVASAILA EATLSFLGLG LVDDPSWGQM LNQAVQSSTF NWWMAAFPGG AIFLTVFAYN LVGESLRDAL DPHLKKSI
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