| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0598 |
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| Symbol | |
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| ID | 7317946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 630678 |
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| End bp | 633836 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643615483 |
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| Product | type I site-specific restriction-modification system, R subunit |
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| Protein accession | YP_002512682 |
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| Protein GI | 220933783 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGG CCAGGGAGAA TGTGTTTCAG CAGGCCATCG TCACCGATCT GGTGGGGCAG
GGCTGGCTGG AAGGGAAGTC GGAGCACTAT GACCGGGTGC TGGCCCTCTA CCCGGAGGAC
CTGGTCGGCT ACGTGCGCAA CACCCAGCCC GAGGCGCTAG AAAAGCTCAC CAAGTTCTAC
GGCGATAAGG TGGAGGACAA GCTGCTGCAA CGCGCGGCCG AGCAAATGGA CAAGCATGGC
GCCCTGCACG TGCTGCGCCA CGGCTTCAAG GACCGTGGCG CGAAGATTCG TCTGTGCACC
TTCAAGCCCG ACCACGGCCT GAACCCCGAG ACCCTGGCCC GCTATGAGGC CAACCGCCTG
CGGGTGGTGC AGGAGGTCTC CTACTCGCCC CACGCCCGCG AAGGCTACAA CCCGCGCCTG
GACCTGGTCC TGTTCGTCAA CGGCGTGCCG GTGGCGACCC TGGAGCTGAA GTCCGAGTTC
AAGCAGGCCA TCGACAATGC CAAGTGGCAG TACAAGAAGG ACCGCCCGCC CAAAGACCCC
AAGACCCGCA AGCCCGAGCC GCTGCTGGCC TTCGGCAAGC GCGCCCTGGT GCACTTCGCC
GTCAGCCAGG AAGAGGTGTG GATGGCCACC AGGCTCGATG GCATGAAGAC CTTCTTCCTG
CCCTTTAACA AGGGCTTTGA GGGCGGGGCC GGCAACCCGC CCAATCCGGA CGGCTACGCT
ACGGATTATC TCTGGAGGCA GGTCTTTGCG CGCGATGCCT GGCTGGACAT CCTGGGCCGC
TTCATCCACC TGCAAAAGGA GGAAAAGGAG GACGGCTTCG GCAAGCGCTA CACCAAGGAG
AACCTGATCT TCCCGCGCTT CCATCAGTGG GATGCGGTCA ACCAGCTGGT GACCACCGCC
CGCGCCGAGG GGCCGGGCCA CAAGTACCTG ATCCAGCACA GCGCGGGTTC CGGCAAGTCC
AATTCCATCG CCTGGACCGC CCACCGCTTG GCCTCGCTGC ACGACGATCA GGATCAGCGC
GTGTTCGACT CGGTCATCGT CATCACCGAC CGCACGGTGC TGGACGACCA GCTGCAGGAG
ACCATCTACC AGTTCGAGCA CGCCGAGGGG GTGGTGTGCC GCATCAGCCG CGATGAGGGC
GAGGGCAGCA AGTCCGCCCA GCTGGCCGAG GCCTTGATGG GGAACACCCG CATCATCATC
GTCACCCTCC AGACATTCCC CTTTGTGCTG GAGGCGATCC AGCAGCAGAC CAGCCTCAAG
GAACGCCGCT TCGCCGTGAT CGCCGACGAG GCCCATTCCT CCCAGACCGG CGCCACCGCC
CGCAAGCTGC GCCAGGTGCT GATGGCCGAC GAGTTGGAAG AGGATGCCGA GATCAGCGCC
GAGGACGTGC TGGACGCCAC CCTGGCCGCG CGCAGCCAGG CGCACAACAT CAGCTACTTC
GCCTTCACCG CCACGCCCAA GGCCAAGACC CTGCAGCTCT TCGGCCGTCC GCCCGATCCC
AACCAGGAGC CGGGGCCGGA CAACCTGCCT GAAGCCTTTC ACGTCTACAC CATGCAGCAG
GCCATCGAGG AGGGCTTCAT CCTCGACGTG CTCAAGCGCT ACACCACCTA CAGCATGGCC
TTCCGCCTGG AGCAGAAGCA GGCTGCTGAG GAGGCGGTGG ACAAGGGCAA GGCCGCCACC
CGGCTCTACC AGTGGGTGAA GCTGCACCCC TACAACATCG AGCAGAAGGT GCAAGTGATC
GTCGAACACT TCCGCCAGCA CGTGGCCGCC CAGCTCAGCC GCCAGGCCAA GGCCATGGTG
GTGACCGACT CGCGAAAGGC TGCCGTGCGC TACAAGCTCG CCCTGGATAA GTACGTGACC
GAGCACGGCT ACACCGACGT GCACGCCCTG GTGGCCTTCT CGGGCGACGT GGAGGACAAG
GAGAGCGGGG CCTCGGTCGA TGGAGGGGCC TTCAACGAGC GCAACATGAA CCCCGGCCTC
AAGGGCCGCG ACCTGCGCGA TGCGTTCGAC ACCGACGAAT ACCAGGTGAT GATCGTCGCC
AACAAGTTCC AGACCGGCTT CGACCAGCCC AAGCTCTGCG CCATGTACGT GGACAAGAAG
CTCTCGGGCG TGGACTGCGT GCAGACCCTC TCACGCCTCA ACCGCACCTA CCCGGGCAAG
GAAGACCCCT TCGTCCTGGA TTTCGTCAAC AAGCCCGAGG ACGTGCTGGC CGCCTTCAAG
CCCTACTACC GCACCGCCGA GCTGGAAGAC GTCTCCGACC CCAACCTGAT CTACGACCTG
CAGGAAAAGC TGGAGAGTGA GCGGATCTTC CGCTGGGAGG AGGTGGAAGC CTTCGCCGAC
GCCTTCTTCG ACCCCAAGAA GACCCAGGAC AAGCTCAACT ACCATGTGCG CCCGGCGGTG
GACCGCTACA GGGAACGCTA CAAATCCGCC ATCCAGGCCC TGCAGGACGC CCAGCGCCAG
GAACGCCAGG CCGACATGAG CGGCGATGAG GTCGGCGCCG CCAACGCCCG CCGCGCCGTC
CAGAGCGCCG GCGAGGAAAA GAGCGTGCTC GACCTGTTCC GCAAGGACCT CGGCAGCTTC
GTGCGCTTCT ACGAGTTCAT CTCCCAGATC GTCGCCCTGG ACGACCGTGA TCTCGAAAAG
CTCGCTGTCT ACGCCCGCCA CCTGCGCCCC TTGCTGCGGC AGGCCGAACT CGACCAGCCG
CTGGACCTCT CCGGCATCGA GTTGACCCAC TACCGCCTGA AAAAGCAGGG CGAGCACCAG
ATCAACCTGC GCGATGGCGA GGGGGACTAC CGCATCCGCG GCGAAGGCCC GGGCGGCGGC
CAAGCGCACG ACCCGGAAAA GGAAGCGCTG GCCGAGATCA TCGCCCGGCT CAACGAGCTG
TTCGCGGGCG AGGGTCTGAG CGACGCCGAT CGGCTCAACT ACCTGCGTAC CCTCTCGGAC
AAGGTGATGG AGAACAAGCC GGTGCTGGCC CAGCTGAAAA ACAATACCCG TGACCAGGTC
ATGCACGGTG ATTTCCCGGC GGCGGTACGC GATGCCGTCA TGGACAGCCT GACGACCCAC
CAGGGCATGG CGGGGCAGCT GCTCAGGGAT CCGGCGCAAC TGCAGCGCTC CGTCGGGGTG
GTGCTCGACT TCATCCTGCA CTCGCTGCGC CAGCCCTGA
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| Protein sequence | MDKARENVFQ QAIVTDLVGQ GWLEGKSEHY DRVLALYPED LVGYVRNTQP EALEKLTKFY
GDKVEDKLLQ RAAEQMDKHG ALHVLRHGFK DRGAKIRLCT FKPDHGLNPE TLARYEANRL
RVVQEVSYSP HAREGYNPRL DLVLFVNGVP VATLELKSEF KQAIDNAKWQ YKKDRPPKDP
KTRKPEPLLA FGKRALVHFA VSQEEVWMAT RLDGMKTFFL PFNKGFEGGA GNPPNPDGYA
TDYLWRQVFA RDAWLDILGR FIHLQKEEKE DGFGKRYTKE NLIFPRFHQW DAVNQLVTTA
RAEGPGHKYL IQHSAGSGKS NSIAWTAHRL ASLHDDQDQR VFDSVIVITD RTVLDDQLQE
TIYQFEHAEG VVCRISRDEG EGSKSAQLAE ALMGNTRIII VTLQTFPFVL EAIQQQTSLK
ERRFAVIADE AHSSQTGATA RKLRQVLMAD ELEEDAEISA EDVLDATLAA RSQAHNISYF
AFTATPKAKT LQLFGRPPDP NQEPGPDNLP EAFHVYTMQQ AIEEGFILDV LKRYTTYSMA
FRLEQKQAAE EAVDKGKAAT RLYQWVKLHP YNIEQKVQVI VEHFRQHVAA QLSRQAKAMV
VTDSRKAAVR YKLALDKYVT EHGYTDVHAL VAFSGDVEDK ESGASVDGGA FNERNMNPGL
KGRDLRDAFD TDEYQVMIVA NKFQTGFDQP KLCAMYVDKK LSGVDCVQTL SRLNRTYPGK
EDPFVLDFVN KPEDVLAAFK PYYRTAELED VSDPNLIYDL QEKLESERIF RWEEVEAFAD
AFFDPKKTQD KLNYHVRPAV DRYRERYKSA IQALQDAQRQ ERQADMSGDE VGAANARRAV
QSAGEEKSVL DLFRKDLGSF VRFYEFISQI VALDDRDLEK LAVYARHLRP LLRQAELDQP
LDLSGIELTH YRLKKQGEHQ INLRDGEGDY RIRGEGPGGG QAHDPEKEAL AEIIARLNEL
FAGEGLSDAD RLNYLRTLSD KVMENKPVLA QLKNNTRDQV MHGDFPAAVR DAVMDSLTTH
QGMAGQLLRD PAQLQRSVGV VLDFILHSLR QP
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