| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0583 |
|---|
| Symbol | |
|---|
| ID | 7317931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 616523 |
|---|
| End bp | 618241 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643615468 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_002512667 |
|---|
| Protein GI | 220933768 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAACTCA CCAACCAGAT CATCCTGCTG GGCAGCGCGG TGCTGCTGCT GAGCGTGCTC
TCCAGCGTGA TCAGCGCCCG CGTCGGCGCG CCCATCCTGC TGGTGTTCCT GGTCATCGGC
ATGCTGCTGG GCGAGGAAGG TCCCGGCGGC GTCATGTTCC ACGACGTGCA GCTGGCGCAC
CTGTTCGGGA GCCTGGCGCT GGCCATCATC CTGTTCGACG GCGGACTGCG CACGCCGGTG
AAAAACTTCC GGGTGGGGCT CAAGCCCGCA GTGGTGCTGG CCACCCTGGG GGTGGTGCTC
ACCGCCGGGA TCACCGGCAT CTTCGCCGCC TGGTGGCTGG GTCTGCACTG GATGGAGGGC
CTGCTGCTGG GGGCCATCGT CGGCTCCACC GACGCGGCCG CAGTGTTCTC CCTGCTGCAC
GGGCGCGGTC TTGAGCTCAA GCAGCGCGTG GGCGCGACGC TCGAGATCGA GTCGGGCAGC
AACGACCCCA TGGCCATTTT CCTCACCATC GTGTTCATCG AGCTGCTCAT CACCGGGCCG
CAGAACATGG GCCTGGTGGT GCTCTGGGAG TTCATTCAGC AGATGGGCCT GGGCGCGCTG
ATCGGCATCG CCGGCGGCTT CGCCCTGGTG TGGATCATCA ACCGCCTGGA CCTCGCCCCC
GGCCTCTATC CCCTGGCGGC CCTGGCCGGT GGACTCACCG TGTTCGGCAT CGCCAGCCAG
GTCAACGGCT CCGGCTTTCT CGCCATCTAC CTGGCGGGCC TGGTGCTGGG CAACCGGCCG
CTGCAGGCCA GCCAGAACAT CAACCGCTTC CACGACGGCA TTGCGCGCCT GTCCCAGATC
GGCATGTTCC TCATGCTGGG CCTGCTGGTG ACGCCCTCGG CGCTGGTGGA CGTGGCCGTG
GATGCCCTGC TGATCGCCGC CGTGCTGATC CTGCTGGCCC GCCCCCTGGC GGTGTGGATC
TCCCTGCTGC CCTTCCACTT CCCCTGGCGC GAGCAGGGCT TCATCGCCTG GGTGGGCCTG
CGCGGCGCGG TGCCCATCAT CCTGGCCCTG TTCCCCATGC TGGCCGGTCT GGAACAGGCA
ACCATGCTGT TCAACATCGT GTTCTTCGTG GTGCTGATCT CCCTGGTCGT ACAGGGCTGG
ACCGTGGCGC CCGCCGCGCG GCTGCTGCGC CTGGAGGTGC CGCCCACCAC CCACGTGGTG
CAGCGCGTGG AGCTGGACAT CCCCGGTCAG CAGGAGATGG AGCTGGTGGG TTATCGCCTG
GCGGACAACA CCCCGGTGGT GCAGGAGAAG TGGACCAGCT TCGTGCTGCC GAAGAGCGTG
CGCGTGGTGG CCCACCTGCG GGACAAGCAG TTGCTGGAGT CCCTGGAACT GCTGGACCTG
CGCGCCGGCG ACTATCTCTA CCTGATGGCG GCGCCGGATG ACCTGCCGGA CCTGGACCGC
CTGTTCGTGC CTCGGGCCGC GCCCAAGCGT CTTTCGGAGC AGACCTTCTT CGGCGAGTTC
GTGCTCAACG GCGATGCGCA GCTGGGCGAC CTGTCCCTGG CCTACGGGCT CACGCTGCCG
GAGGGCGTGG CGGAGCAGAC GGTGGAGGAG TACATCCGCA AGAAACTGCA CACCGCGCCG
GTGGTCGGCG ACCGCGCGTC CCTGGCCGGC GTGGAGCTGG TGGTGCGCGA GATGGAAGGC
GCACGCATCA CCCGGGTGGG CCTCAAGCTT TCCCGATGA
|
|---|
| Protein sequence | MELTNQIILL GSAVLLLSVL SSVISARVGA PILLVFLVIG MLLGEEGPGG VMFHDVQLAH
LFGSLALAII LFDGGLRTPV KNFRVGLKPA VVLATLGVVL TAGITGIFAA WWLGLHWMEG
LLLGAIVGST DAAAVFSLLH GRGLELKQRV GATLEIESGS NDPMAIFLTI VFIELLITGP
QNMGLVVLWE FIQQMGLGAL IGIAGGFALV WIINRLDLAP GLYPLAALAG GLTVFGIASQ
VNGSGFLAIY LAGLVLGNRP LQASQNINRF HDGIARLSQI GMFLMLGLLV TPSALVDVAV
DALLIAAVLI LLARPLAVWI SLLPFHFPWR EQGFIAWVGL RGAVPIILAL FPMLAGLEQA
TMLFNIVFFV VLISLVVQGW TVAPAARLLR LEVPPTTHVV QRVELDIPGQ QEMELVGYRL
ADNTPVVQEK WTSFVLPKSV RVVAHLRDKQ LLESLELLDL RAGDYLYLMA APDDLPDLDR
LFVPRAAPKR LSEQTFFGEF VLNGDAQLGD LSLAYGLTLP EGVAEQTVEE YIRKKLHTAP
VVGDRASLAG VELVVREMEG ARITRVGLKL SR
|
|---|
| |