Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0543 |
Symbol | |
ID | 7317891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 574112 |
End bp | 575974 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643615428 |
Product | hypothetical protein |
Protein accession | YP_002512627 |
Protein GI | 220933728 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.568547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCATCC GCGCACACGC CAGACTCCGC CATCTCTGCA CGGGACTCCT GTCCCTGTGC CTGGCCGCGC CCGTGGCCGC CGTCTGGGAG ACCTCGCCCC GGGTCCGGGA CCTGGACTAC GGCAGTGTGC TCTATCCCTT CTACCAGCAG GAGCATTTCG CGGCCATCAC CCGGCTGATG GTGGTCCAGT CCCGCGGGCC GATCCCGCAT CACGAATACG AGGCCCGCTT GCTGCTCGGC GGCCTCAAGC TCACCTACGG CCTGCATGAC AGGGCCGAGA CCCTCTTCAG GCAGCTGCTC GGACCCGAGG TGCCCGCCGC GATACGCAAC CGGGCCTGGT TTCACCTGGG GCGCATCCAG TACCAGAAAG GCCTGCACGA ACAGGCCGAG GCCAGCCTGC AGCGCATGGA GGGCGAACTG GGCCCGGCCC TGGCGGGCGA ACGCCAGCTG CTGCTTGCCC TGAACCGCAT GGCCCGCGAT GACTTCGCCG GCGCCGCCGC CGCCCTGCGT CCCTGGCGCG GCAGCCGCGA GCGGGCCGAC TACGGGGACT TCAACCTGGC GGTCGCCCTG ATCCAGGGCG GCGACAGGGA GGCTGGGCTC GCCCTGCTGG ACCGCCTGGG ACGCGCCCGG GCGACGGATG CCGAATCCCT GGCCCTGCGC GACCGCGCCA ACGTGGCGGC CGCCGAGGCG CTGCTGCGGG CGGACGAGCA CGCCCGTGCC CGCGCCCTGC TGGACCGGGT GCGCCTGGAC GGGCCCTACT CCGGGCGCGC CCTGCTGTGG AGCGGCTGGG CGTCCACGGA ACTGGGCGAC CCCCGCCGCG CCCTGGTGCC CTGGACCCGT CTGCAGGGCC ACGCCGATAC CGACCCCGCG GCCCAGGAGG CCCTGCTGGC CGTGCCCTAC GCCTACCTGG AACTGGGCGA GCAGACCCGC GCCGCCGCCT GGTTCGAGAC CGCCGTGAAC ACCCTGGATG CCCGGCGCGC CGAACTGCGC AAGGCCATGG CGGAGATCGA ACGCGGCGAG ATGGTGGTGG GCCTGATCCT GCGGGAAAAC CTGCGCAGCG CTGCCGGGCG GGCACCGCTG CCGGCCCAGG GCTACCTGGT GGACCTGCTC GCCGGACACC GATTCCAGGA GGTCTTCCAG AACTATCTGG ACCTGCATGC CCTGCAGCGC AACCTGGCGC ACTGGGCCGG CAGCATCGAC AGCTTCGACG ACATGCTCCA GGCCCAGGAG GCCCTGTACG CCCGGCGCCT GCCCGAGACC CGCGCGCGCC TGGAGACCCT GGACCTGCGC ACCCCCAACG AACGGCGCGC CGAACTCGCG GCACGCTTTG CCCGCGCCGA GCAGGAGGGC GATGCCTGGG CACTGGCCAG CATCCAGGAA CAGCGCCGCC GCCAGCGCCT GCAGGCCGTG GAGGAACGAC TGTCGCGGCT GCCGGACGAT GATCCGGAGG TGGTCGAACT GCGCCAGCGC CAGGCCCTGC TCCAGGGGCT GGTGCACTGG GAGGTGCAGA CCGACTTCGC GCCCCGCTTG TGGGAGGCGC GCAAGGGCCT GCTGGCCGTG GATGCCCAAC TGGCCGAACT GGCCAGCCGC AGGCGCAGCC TGCAGGAGGC CGAACAGCAC GCCCTGACCC GTTTTCAGGG CTTTGCCGGG CGCATCGAGG CCCAGCGGGC ACAGATCGCC CGGCTGCAGC CCCGGGTCGA CGCCACGCTG GCCGCCCACG AGCAGCACCT GCAGGCCATG GCCCTGGAGG CCCTGCAGGC CCACCTGCAC ACCCTGGATG ACCGGGTCCT GCGGGCCCGC TACACCCTGG CGCGGATCTA CGAGGCCCAG GAAACGCTTG GCCAGCCGGA GCGCTCGCCA TGA
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Protein sequence | MGIRAHARLR HLCTGLLSLC LAAPVAAVWE TSPRVRDLDY GSVLYPFYQQ EHFAAITRLM VVQSRGPIPH HEYEARLLLG GLKLTYGLHD RAETLFRQLL GPEVPAAIRN RAWFHLGRIQ YQKGLHEQAE ASLQRMEGEL GPALAGERQL LLALNRMARD DFAGAAAALR PWRGSRERAD YGDFNLAVAL IQGGDREAGL ALLDRLGRAR ATDAESLALR DRANVAAAEA LLRADEHARA RALLDRVRLD GPYSGRALLW SGWASTELGD PRRALVPWTR LQGHADTDPA AQEALLAVPY AYLELGEQTR AAAWFETAVN TLDARRAELR KAMAEIERGE MVVGLILREN LRSAAGRAPL PAQGYLVDLL AGHRFQEVFQ NYLDLHALQR NLAHWAGSID SFDDMLQAQE ALYARRLPET RARLETLDLR TPNERRAELA ARFARAEQEG DAWALASIQE QRRRQRLQAV EERLSRLPDD DPEVVELRQR QALLQGLVHW EVQTDFAPRL WEARKGLLAV DAQLAELASR RRSLQEAEQH ALTRFQGFAG RIEAQRAQIA RLQPRVDATL AAHEQHLQAM ALEALQAHLH TLDDRVLRAR YTLARIYEAQ ETLGQPERSP
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