Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0462 |
Symbol | |
ID | 7316548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 492538 |
End bp | 493095 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643615346 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002512547 |
Protein GI | 220933648 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0864199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTGGA CCCATTTGTT CGGGGGAGGA TCCCGTGCCT GGCAGCAGCG GCTCAAGGAG AGTCGCATCC GGTTGTACCG GCTGGCGCTG TCCTGGTGCG GTGATGAGAT GCTGGCCGAC GACCTTGCCC AGGAGACCCT GGCCAGGGCG TTGCGCAAAC ACCAACAACT GCGGGACCCG GAGCGGGTCG ACGCCTGGCT GTTCGCCATC CTGCACAACT GCTGGCGCGA ACACCTGCGA CGCCTCAAGC CCCAGGTCCC CCTGGACGAT ATTCAGTTCG TCTGTGATCG CTGCCCGGAG TACGAGCACA CACAGGACGA AATCGTGTTC CAGGTGCGTC AGGCGGTGGC CGCCCTGCCC ATGGGGCAGC GGGAAGTGGT CACCCTGGTG GACCTGGAGG GACTGAGCTA CGCGGAAGTG GCCCAGGTCC TGGAAATACC CCTGGGCACG GTGATGAGCC GTCTGAGCCG CGCAAGGCGG GCCCTGAGAG AGACCCTGGA GTCCGTGCAA TCGCCCGCCG GGAACCAGGA AGCGCCGAAA CTCTGGAGAG TCAAGTGA
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Protein sequence | MSWTHLFGGG SRAWQQRLKE SRIRLYRLAL SWCGDEMLAD DLAQETLARA LRKHQQLRDP ERVDAWLFAI LHNCWREHLR RLKPQVPLDD IQFVCDRCPE YEHTQDEIVF QVRQAVAALP MGQREVVTLV DLEGLSYAEV AQVLEIPLGT VMSRLSRARR ALRETLESVQ SPAGNQEAPK LWRVK
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