Gene Tgr7_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0334 
Symbol 
ID7316473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp375545 
End bp376135 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content66% 
IMG OID643615218 
ProductSNARE associated Golgi protein 
Protein accessionYP_002512419 
Protein GI220933520 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGCG AGGCCGTTGA ACGCCTGGGC TACGTGGGCC TAGGCATGAC CATGCTGGCG 
CTGGCGCCGG AATTCCTCAT GCCCTTCGCC GGTTTCCTGG CCAACCAGTC CCAGCTCAAT 
CTGCTCGGGG TGATCATCGC CGGCACCGTC GGTGGCACCC TTGGCTCGAC GATCCTCTAC 
CTCATTGCCC GACGGGTGGG TGAGCGGCGG GTGCGCCGCT TCTTCCAGCG CCGGGGACGA 
TTCCTGCTGC TGCGGGAAAG CGATCTGGAT ACCGTGCTGG ACGTGTATGA TCAGCATGGG 
GAGATCCTGG TGCTGGCGGG CCGTTTCGTG CCCACGGTGC GCAGCCTGGT CTCCCTGCCC 
GCGGGCCTGC TGCCCATGCC GTTTCCCCGC TTCTTCCTGT TCACCCTGGC GGGCACGGGT 
CTCTGGTGTG CCGTGCTCGC CGTGGGCGGC TACCTGATGG GCGCCCAGTG GCGCCTGCTG 
GAATCCTGGC TGGGGTTCTA CGGTGCCACG GTGTTCAGCC TGATTCTGCT GGCAATAGGG 
CTGTTCGCCC TGCAGCGGGT GAAGGAGGCG GTGCTTGGGA GTGAGAAGTG A
 
Protein sequence
MAGEAVERLG YVGLGMTMLA LAPEFLMPFA GFLANQSQLN LLGVIIAGTV GGTLGSTILY 
LIARRVGERR VRRFFQRRGR FLLLRESDLD TVLDVYDQHG EILVLAGRFV PTVRSLVSLP 
AGLLPMPFPR FFLFTLAGTG LWCAVLAVGG YLMGAQWRLL ESWLGFYGAT VFSLILLAIG 
LFALQRVKEA VLGSEK