| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0230 |
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| Symbol | |
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| ID | 7316808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 249497 |
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| End bp | 250078 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643615115 |
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| Product | membrane protein, rhomboid family |
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| Protein accession | YP_002512316 |
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| Protein GI | 220933417 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACC CGGCAAAACC GCGCCTGGCA CGCTGGGCGC TGCCTCTCAC GCTAGCCCTG
GCCGCCCTGC TGGCCCAGGC CTTCGGCGGC CTGGAGGCCT TGCGTCTGGA ACGGGGGCTA
TGGCTGGCAC AGCCCTGGCG CCTGGTCACC GGCCAGCTCA TGCACCTGGG CTGGGCCCAC
CTGGCCATGA ACCTGGCCGG TCTGGCCATC ATCTGGCTCA TCCTCGCCCG ACAACTGCCG
CTCTGGCAAT GGTGGATGAC GGTGTTGGTC TGTGCGGTGG GTGTAAATCT GGGACTGCTG
GCCTTCTCAC CCACGGTGGG CTGGTACGTG GGCCTGTCCG GCATCCTGCA CGGCCTGATC
GCGGCCGGCG CCCTGGCCGG CCTGAAGCGC CAGCCCAGCC TGGGTCTGCT ACTGCTGGGT
CTGATCGCCA AGCTCGCCTG GGAGCAGTTC GCCGGCCAGG ACCCCGGCAC CGCACAACTG
ATCGGCGGCG CGGTGATCGT GGATGCGCAT CTTTACGGGG CGCTCGCGGG GGCTGTGTGT
AGTGCTTGTC TTCTGTTATT CCAGATGCAT AGATATGCAT AA
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| Protein sequence | MNNPAKPRLA RWALPLTLAL AALLAQAFGG LEALRLERGL WLAQPWRLVT GQLMHLGWAH
LAMNLAGLAI IWLILARQLP LWQWWMTVLV CAVGVNLGLL AFSPTVGWYV GLSGILHGLI
AAGALAGLKR QPSLGLLLLG LIAKLAWEQF AGQDPGTAQL IGGAVIVDAH LYGALAGAVC
SACLLLFQMH RYA
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