| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2919 |
|---|
| Symbol | |
|---|
| ID | 3581597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 3433509 |
|---|
| End bp | 3434468 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637686648 |
|---|
| Product | metalloprotease |
|---|
| Protein accession | YP_290975 |
|---|
| Protein GI | 72163318 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2321] Predicted metalloprotease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACGAGT CACGCTGGGA CGGGGAGTGG GAAGACAGGC AGACCGCGGA GAGCCACAAC
CGCGCCTGGG GCCCCTTCGC CGCGGTGGGG GCGGCGGTCC TCGCCTTGGC GCTCCTGCTG
GGCCACAGCA CCGGGGCGTT CGACGTGCTG CGGCCAGATC ACGACGCCGC CGAACCGGAA
CCGCAGGACG CCCCCGATGA CACCCGTCCA AGGCCCGACA GCAGCCTGCT CACAGAGTTC
CCTGAAGAGA GCGTGCTCTT CCAGAACCCG CTCTACGCCA CTGGGCGGCT GGCCTCCCCG
CCCTGCCCCG CCCCGGAGCT TGACGTCCAC GACGCCGACT CCATGGAGCA CTTCCTGCAC
ACGCTCACCG ACTGCCTCGA CCAGGCGTGG ACGGTCCAGT TCGCGAAAGC CGGACTGGAC
TTCGAACCCC CGGAACGGGT CTTCTGGCGG AAACCCGGCA GCAGCCCGTG CCGCGACTAC
CCGTCAGCCG CGGGCGGCTT TTACTGCAGA GCGAACAAGA GCATCTACCT GGGGGTGCGG
GACATCGCGG CTAAATGGAA GTACAGCCCG GAGAGCGTCG TCTACGCCTC GCTCCTCGCC
CACGAGTACG GGCACCACGT GCAGGGAGAA GCGGGGATCC TGGAGTACTA CCACGAGCAG
CGCCGTCAAG AAAGCGACCC CGCCCAGCAG AGCTTCTGGA CCCGCCGCAG CGAACTGCAA
GCCAACTGTC TGGCCGGGGT CTTCCTCGGA TCAGTGCAGG TCACCTATCC CATCGGGGAC
AGCGAATACG AGACGCTTCT CGAAGACGCC GCGAACACTG CGGACCGGGA GGGCAGCAGC
GCCGCGGAAC GCACCCACGG GTCTGCACAC AACAGCGCGC TCTGGCTGGA GCGAGGGCTC
AGCCACCAGA CCCCCGGCTC CTGCAACACG TGGACAGCCG ACGAGAGCCT GCTCGAATAG
|
|---|
| Protein sequence | MDESRWDGEW EDRQTAESHN RAWGPFAAVG AAVLALALLL GHSTGAFDVL RPDHDAAEPE
PQDAPDDTRP RPDSSLLTEF PEESVLFQNP LYATGRLASP PCPAPELDVH DADSMEHFLH
TLTDCLDQAW TVQFAKAGLD FEPPERVFWR KPGSSPCRDY PSAAGGFYCR ANKSIYLGVR
DIAAKWKYSP ESVVYASLLA HEYGHHVQGE AGILEYYHEQ RRQESDPAQQ SFWTRRSELQ
ANCLAGVFLG SVQVTYPIGD SEYETLLEDA ANTADREGSS AAERTHGSAH NSALWLERGL
SHQTPGSCNT WTADESLLE
|
|---|
| |