| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2885 |
|---|
| Symbol | |
|---|
| ID | 3581790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 3400931 |
|---|
| End bp | 3401821 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637686614 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_290941 |
|---|
| Protein GI | 72163284 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5495] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGG CGCATGACAC ACGGCAGCGC CCCGCACGGC TCGCCGTCGG GGTCATCGGC
CCGGGCCGGG TCGGGTCAGC ACTCGGTGCG GCACTCGAAC GCGCCGGACA CCGCGTCGTC
GCGGCCGCAG CGATCTCCGA GGCGTCACGG CAGCGGGTCG CCGCCCGCCT GCCCCACGCC
CGGATCCTCG AACCCGCCGA CGTCATCGCG GAAAGCGACC TGGTCCTGCT GACCGTCCCC
GATGACGCCC TCGCTCCGCT CACCAACGGA CTCGCTGCCA CCGGTGTCAC CGTCACGGGA
AAACTCGTCG CGCACGCTAG TGGCGCACAC GGCTACAGCG TGCTCGCCCC CCTCACCCAG
GCCGGGGCAC TCCCGCTCGC CCTCCACCCG GTCATGACCT TCACCGGCCG GGACGAAGAC
CTCACCCGGT TGGCCAACTG CTCTTTCGGA GTCACCACAC CCGAATCGCT CCGCCCCATC
GCCGAGGCCC TCGTCATGGA AATGGGGGCC GAACCCGTGT GGATCGCCGA AGAATACCGG
GCGCTCTACC ACGCGGCCCT CGCCCACGGT GCGAACCACC TTGTCACCCT CGTCACCGAA
AGCGCGTCCC TCCTCGCCCA AGCCGGGGTC GACCACCCCG GCCGCATGCT CGCCCCACTC
CTCGGCGCAG CCCTGGACAA CGCGCTACGC CTCGGCATCG ACGGCCTCAG TGGGCCGGTG
ATGCGTGGAG ACGCCGACAC CGTCGCCACG CATCTCGCCC AACTACGCGA ACACGCACCG
GAGAGCGTCG CGAGCTACCT CGCGCTGGCC CGCCTCACCG CGGACCGCGC GCTCGCGGCG
GGTCTGCTCA GACCGCAGGA CGCCGAACGG CTCCTCGACG TCCTCACCTG A
|
|---|
| Protein sequence | MNTAHDTRQR PARLAVGVIG PGRVGSALGA ALERAGHRVV AAAAISEASR QRVAARLPHA
RILEPADVIA ESDLVLLTVP DDALAPLTNG LAATGVTVTG KLVAHASGAH GYSVLAPLTQ
AGALPLALHP VMTFTGRDED LTRLANCSFG VTTPESLRPI AEALVMEMGA EPVWIAEEYR
ALYHAALAHG ANHLVTLVTE SASLLAQAGV DHPGRMLAPL LGAALDNALR LGIDGLSGPV
MRGDADTVAT HLAQLREHAP ESVASYLALA RLTADRALAA GLLRPQDAER LLDVLT
|
|---|
| |