Gene Tfu_2549 details

Gene Information

• Locus tag: Tfu_2549
• ID: 3580111
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 3003672
• End bp: 3004340
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637686265
• Product: response regulator receiver
• Protein accession: YP_290605
• Protein GI: 72162948
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTGCG TTTTGCTGGC CGAAGACGAT GCTTCGATCT CTGAACCGTT GGCCCGCGCG 
CTCCGGCGGG AAGGATATTC AGTCGACGTC ACCGTCGACG GTATGGAAAC ACTCGACCGT 
GCCCGTAGCG GCGACATCGA CCTGCTCGTC TTGGACTTGG GATTGCCCGA ACTGGACGGG 
CTCGAAGTAG CCCGGCGGCT GCGTTCCGAA GGGCACGGAA CTCCGATTCT CATCCTCACC 
GCCCGGGCCG ACGAGGTGGA CACCGTCGTC GGACTGGACG CGGGGGCCGA CGACTACGTC 
ACCAAACCCT TCCGCCTGGC AGAGCTGCTG GCCCGGGTCC GGGCCCTGCT GCGCCGCGGC 
GGCGGCGAAG TCCCCGTCGT CCACGGGGTG CGCATCGACA CGGACTCCCG CCGGGCCTGG 
CTCGGCGACC GCGAACTGCA ACTGACCACG AAAGAGTTCG ACCTGCTGCG GGTCCTGGTC 
CGCGAAGCGG GCAAGGTGGT CACCCGGGAG CAGATCATGC GGGAGGTATG GGACACCAAC 
TGGTGGGGGT CCACGAAAAC ACTGGACATG CACATTTCCT GGCTGCGCCG GAAGCTCGGC 
GACGACGCCA ACCAGCCCTC CTACATCACT ACGGTGCGGG GGGTCGGCTT CCGGTTCGAG 
AAGGAGTGA 

 

Protein sequence

MTCVLLAEDD ASISEPLARA LRREGYSVDV TVDGMETLDR ARSGDIDLLV LDLGLPELDG 
LEVARRLRSE GHGTPILILT ARADEVDTVV GLDAGADDYV TKPFRLAELL ARVRALLRRG 
GGEVPVVHGV RIDTDSRRAW LGDRELQLTT KEFDLLRVLV REAGKVVTRE QIMREVWDTN 
WWGSTKTLDM HISWLRRKLG DDANQPSYIT TVRGVGFRFE KE