Gene Tfu_2502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2502 
Symbol 
ID3580761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2947970 
End bp2948965 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content69% 
IMG OID637686218 
Productputative integral membrane protein 
Protein accessionYP_290558 
Protein GI72162901 
COG category[S] Function unknown 
COG ID[COG1300] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATCTTG ACCTCTTCAT TGCCGAGCGG CGTCCTGCCT GGGAGCGGCT GCAGACCCTG 
GTGCGCCGCC ACCGCCGCCT CACCGGGGAG GAAATCGACG AACTCGTCGA CCTGTACCAG
CGGGTCGGCA CCGACTTGTC GGTGCTACGC TCCACGGGAC ACGACCCGGC GCTCGCCGGA
TGGCTGTCGG GCCTGGTGGC GCGCGCCCGC GCCGTGATCA CCGGAGCCCA CGCGGGATCC
TGGCGCGACT TCACCCGGTT CTTCACCCGC GTTTTTCCCG CCACCCTGTA CCGGCTGCGC
TGGTGGTGGC TGGCCGTGAC CGCGGTCAAC CTCGCGGTGG CTTTCGGGGT GGGAGTCTGG
ATCGCGACCA CCCCCGAAGC CCAGACAGCG ATGGGAACCC CCGAAGAGAT CAGGGCCTAC
GTCGAGCACG ACTTCGCCAA CTACTACGTC GAGCATCCAG GGGCGTCGTT CGCCGCCCTG
GTGTGGACCA ACAATGCGTG GGTGGCCGCC CAGTCCATCA TCTTCGGCGC GTTCCTCTGC
CTGCCCGCCG TCTACGTGCT GCTGCTCAAC TCCCTCAACC TGGGAATGGC CGGCGGTCTG
ATGGCCGCCC ACGGCAAAAC CGACATCTTC TTCGGGCTCA TCCTCCCGCA CGGCCTGCTG
GAACTGACCG CGGTGTTCAT CGCCGGCGCG GTCGGGATCC GGATCGGCTG GACTTTCCTG
GCCCCGGGGC CGCGACCCCG CGTCCAGGCA GTGGGCGAGG AGACCCGCGC TGCGATGGGG
GTGGCGCTGG GGCTCGTCGT CGTGCTGTTC GTCTCCGGCC TCATCGAAGG GTTCGTGACC
GGCTGGGTGC ACATCACCTG GCTGCGGATC GGGATCGGCG TGGCCGCGGA AGCGTGCTTC
CTGCTCTACG TGTTCACTCT GGGCCGCCGC GCAGCCCAGG AAGGGGAGAC CGGCGACATC
GCAGACGCCC CGCAGACGGT CGCGGTCGCA GGCTGA
 
Protein sequence
MDLDLFIAER RPAWERLQTL VRRHRRLTGE EIDELVDLYQ RVGTDLSVLR STGHDPALAG 
WLSGLVARAR AVITGAHAGS WRDFTRFFTR VFPATLYRLR WWWLAVTAVN LAVAFGVGVW
IATTPEAQTA MGTPEEIRAY VEHDFANYYV EHPGASFAAL VWTNNAWVAA QSIIFGAFLC
LPAVYVLLLN SLNLGMAGGL MAAHGKTDIF FGLILPHGLL ELTAVFIAGA VGIRIGWTFL
APGPRPRVQA VGEETRAAMG VALGLVVVLF VSGLIEGFVT GWVHITWLRI GIGVAAEACF
LLYVFTLGRR AAQEGETGDI ADAPQTVAVA G