Gene Tfu_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2479 
SymbolprfB 
ID3580587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2917347 
End bp2918474 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content65% 
IMG OID637686195 
Productpeptide chain release factor 2 
Protein accessionYP_290535 
Protein GI72162878 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGAAC TAGACCCCGC AGAGCAGATC AAGGAACTCA CATCCACGCT GGAGAACATC 
GAGGCCGTAC TGGACCTCGA CGCCAAGCGC ACGGAAATTG AGCAGCTGCG GGAGCAGTCA
GCCGATCCCG AGCTGTGGAA CGACCAGGCC AATGCGCAGA AGGTCACGCG GCGGCTCTCC
TTTTTGGAGT CGGAAGTCTC CAAGGTCGAG AACATCCGCA GCCGGATCGA TGACCTCGGT
GTGCTCTTCG AGCTCGCGGC GGCAGAGAAC GACGCCGAAA CCCTTGCCGA GGCCCGCAGG
GAGCTGGCCG CGCTGCGCAA GGACATCAGC GATCTTGAGG TGCGCACCCT GCTATCGGGC
CCCTACGACG AGCGTGAAGC ACTGATCAGC ATCAACGCTC AGGCGGGTGG GGTCGACGCG
GCAGACTGGA CGCAGATGCT GCAGCGGATG TACCTCCGCT GGGCGGAGCG CCACGGCTAC
CCGACGGAGA TCTACGAGAC CTCCTACGCT GAGGAAGCCG GCATCAAGTC CACGACGTTC
GTGGTCAAGG CGCCCTACGC CTACGGCATG CTGCGCGGCG AGCACGGTAC GCACCGCCTG
GTGCGGATCT CGCCGTTCGA CAACCAGAGC CGCCGTCAGA CCTCGTTCGC CGGAGTCGAT
GTGGTCCCGG TCGTCGAGCA GAGCGACCAC ATTGAGATTG ACGAAAGCGA ACTGCGGATC
GACGTGTACC GCTCTTCAGG GCCCGGCGGC CAGGGCGTCA ACACCACCGA CTCGGCGGTG
CGGATCACCC ACCTGCCGAC CGGGATCGTG GTCTCCTGCC AGAACGAACG CTCCCAGTTG
CAAAACCGCG CTACCGCGAT GTCGATCCTC CAGGCCAAGC TGCTGGAACG CAAACGCCAG
GAGGAGGAGG CCGAGCTCGC CGCGCTCCGC GGTGAGTCCG CGCGGGCGTG GGGAACCCAG
ATGCGCAACT ACGTGCTCCA CCCCTACCAG AGCGTCAAAG ACATCCGCAC CGGGGTGGAG
ACCGGGAACA CCAGCGCTGT CCTCGACGGA GAGATCGACG AGTTCATCAA CGCTGGGATC
CGCTGGCTGC GGAGCCGGGA GAGGGACGAG CAGAAGAAAG CGGGATAA
 
Protein sequence
MAELDPAEQI KELTSTLENI EAVLDLDAKR TEIEQLREQS ADPELWNDQA NAQKVTRRLS 
FLESEVSKVE NIRSRIDDLG VLFELAAAEN DAETLAEARR ELAALRKDIS DLEVRTLLSG
PYDEREALIS INAQAGGVDA ADWTQMLQRM YLRWAERHGY PTEIYETSYA EEAGIKSTTF
VVKAPYAYGM LRGEHGTHRL VRISPFDNQS RRQTSFAGVD VVPVVEQSDH IEIDESELRI
DVYRSSGPGG QGVNTTDSAV RITHLPTGIV VSCQNERSQL QNRATAMSIL QAKLLERKRQ
EEEAELAALR GESARAWGTQ MRNYVLHPYQ SVKDIRTGVE TGNTSAVLDG EIDEFINAGI
RWLRSRERDE QKKAG