Gene Tfu_2437 details

Gene Information

• Locus tag: Tfu_2437
• ID: 3580544
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 2862035
• End bp: 2863996
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637686153
• Product: peptidase M20D, amidohydrolase
• Protein accession: YP_290493
• Protein GI: 72162836
• COG category: [R] General function prediction only
• COG ID: [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase
• TIGRFAM ID: [TIGR01891] amidohydrolase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGCAGG CGGTCGATCC ACGACGTGTC ACGGAACACG GCAGCGAGGT CATGCGACTC 
GTCGACGAGA TTTTCCCCCT CGTCGAGGGT TTCTACGTTG ACCTGCACCG AAACCCTGAA 
TTGTCGCATC AGGAGCACCG CACCTCCCAA GCCGTGGCCG AATGGCTGTC CCGGGCGGGG 
TACGAAGTCA CGACCGGGAT CGGCGGTACC GGGGTCGTCG GGATCCTCCG CAACGGTGAA 
GGACCGACCG TGCTGCTCCG CTGCGCTATG GACGCCCTGC CCCTCGCAGA GCAGACCGGT 
CTGCCCTACG CCAGTACCGC CCGCGGGACG ACGGCCGACG GCCAAGAAAC GCCGATCATG 
CACGCCGCCG GCCACGACGC GCACACCGCC TGCCTGGTCG GGACAGCAGA CCTGCTGTCC 
AGTTCACGGA AACACTGGAG CGGCACCCTG ATGGTCGTCG CACAGCCCGG CCAGGAGACC 
CTGGACGGCG CCGAGGCCAT GCTCGCTGAC GGTCTCTACG AACGCTTCGG GCGCCCCGAC 
ATCGTCCTCA CCCAGCGGGT CGGCCCCCAA CCCGCCGGAA TGATCGCCCA CCGGGCCGGG 
GTCATCCTCG GCATGTCCAC CACCGTGGGA GTGCGGATCT TCGGCAGCCC GGGCCACGGC 
GGATTCCAGC CGCAGACCGG TGTCGACCCC GTGGTCATCG CCGCATCCAT CATCACACGC 
CTGCAGACCA TCGTCGCGCG CGAAGTCAAC CCCAGTGAGA TGGCGGTCCT CACCACGGGA 
GTGGTGCGCG CCGGAACCAA AGCCGACCTC GTCCCCGACG AGGCGTACCT GGAAATCAAC 
ACGCGCTGCC TCAACGAGCG GGTAGCCGAC CGGATTTACG CGGCCATCGA ACGCGTAGTC 
AAAGCCGAAG CCGCTGCCTC GGCAGCCCCC CGCGAACCCG AGGTCACCGA GATCCGCAGG 
ACCAGCCTGA TCCGCAACCA CGCGCAGCAC ACCCGCGCGG TGTCCTCCGC CCACCGGGCC 
TACTTCGGCG ACGCCTATGT GATCGACCTG CCGGAACCTT TCGCGGTTGG CGACGACTTC 
GGTGCGTTCG GGCTCCCTGA TGACCCTGAA CCCGTGCCAT ACGTCATGTG GCTCCTCGGC 
TCCACCCCGC ACGACGTGTG GTCCGCCGCC CCCGGAGCCA CCCCCTTCGA CAAACTCGCG 
TCAGTGCCGG GCTCCCACTC CTCCCAATTC GCCCCCGATC GCGAAGCCAC CCTGCGCGCC 
GGAATCGCCG CACTCACGAT CGGTGCCCTC ACCTATCTGG GCCGCACCTC TGGACCGGGA 
CGGGCCACCT CCGGCCTGGC GCAGATCGCC AGTTCCCGGA TCACGGAGGA CGAGTCGACG 
CAGAGCGCGG ACATGGAGGC GCTGCTCGCG GACGATGATG AGGGGGAGTC GACGCAGAGC 
GCGGACATGG AGGCGCTGCT CGCGGACGAT GATGAGGGGG AGTCGACGCA GAGCGCGGAC 
ATGGAGGCGC TGCTCGCGGA CGATGATGAG GGGGAGTCGA CGCAGAGCGC GGACATGGAA 
GCGCTGCTCG CGGACGATGA TGAGGGGGAG TCGACGCAGA GCGCGGACAT GGAAGCGCTG 
CTCGCGGATG ACGATGAGGG GGAGTCGACG CAGAGCGCGG ACATGGAGGC GCTGCTCGCG 
GACGATGATG AGGGGGAGTC GACGCAGAGC GCGGACATGG AAGCGCTGCT CGCCGACGAT 
GAAGGGGAGA CCACGCAACG GGCCAACATG GCGGAACTCC TGAACGATCC TCCCCCGCCC 
CCACGAGGCC CCACGCAGGG ACCCCAGACC GGCCCCGCAC CTTCCTTCCG CCCGCCCTCC 
GGTCCCCCGC TCGCCGCTCC GCCCCCCATG GGGCCGCCGG TTGATGCCCC GCCCCCGCCG 
GAGACCCCGC CCCACTCAGA CGAACCTCCG TACCGCTACT GA 

 

Protein sequence

MPQAVDPRRV TEHGSEVMRL VDEIFPLVEG FYVDLHRNPE LSHQEHRTSQ AVAEWLSRAG 
YEVTTGIGGT GVVGILRNGE GPTVLLRCAM DALPLAEQTG LPYASTARGT TADGQETPIM 
HAAGHDAHTA CLVGTADLLS SSRKHWSGTL MVVAQPGQET LDGAEAMLAD GLYERFGRPD 
IVLTQRVGPQ PAGMIAHRAG VILGMSTTVG VRIFGSPGHG GFQPQTGVDP VVIAASIITR 
LQTIVAREVN PSEMAVLTTG VVRAGTKADL VPDEAYLEIN TRCLNERVAD RIYAAIERVV 
KAEAAASAAP REPEVTEIRR TSLIRNHAQH TRAVSSAHRA YFGDAYVIDL PEPFAVGDDF 
GAFGLPDDPE PVPYVMWLLG STPHDVWSAA PGATPFDKLA SVPGSHSSQF APDREATLRA 
GIAALTIGAL TYLGRTSGPG RATSGLAQIA SSRITEDEST QSADMEALLA DDDEGESTQS 
ADMEALLADD DEGESTQSAD MEALLADDDE GESTQSADME ALLADDDEGE STQSADMEAL 
LADDDEGEST QSADMEALLA DDDEGESTQS ADMEALLADD EGETTQRANM AELLNDPPPP 
PRGPTQGPQT GPAPSFRPPS GPPLAAPPPM GPPVDAPPPP ETPPHSDEPP YRY