Gene Tfu_2419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2419 
SymbolprfA 
ID3580258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2838943 
End bp2840010 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content67% 
IMG OID637686134 
Productpeptide chain release factor 1 
Protein accessionYP_290475 
Protein GI72162818 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.922635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCTGG ACGACCTACT CGGCGAGTAC TACGAGCTGG AGCAGCAGCT CGCCGACCCA 
GCAGTGCACG CCGACCAGGC TCAGGCACGC ACCCTGGCCA AGCGCTACTC CCAGCTCACC
CCCATCGTCG CCACCTACCG GGAACTGAAC CGGGTCGAAA GCGACATCGA GACCGCCCAG
GAGCTGGCCG CCGAGGACCC GAGCTTCGCT GACGAGGCGA AGCAGCTTGC CGCCCAGCGC
GAAGAACTGG TTCAACGGCT CCGCACCCTG CTCATCCCCC GCGACCCCAA CGACGACAAA
GACGTCATCC TGGAGGTCAA GGCGGGAGAG GGCGGTGAGG AGTCCGCGCT GTTCGCCAGC
GACCTGGTGC GGATGTACCT GCGGTACGCC GAGCGTCAGG GCTGGAAGAC CGAGATCATC
AGCGCCACCC ACTCCGACCT GGGCGGCTAC AAGGACATCA CCATCGCGAT CAAGAACCGC
GGCACGGTGG AACCCGGGCA AGGCGTGTGG CACCGGCTCA AGTTCGAAGG CGGAGTCCAC
CGCGTCCAGC GGGTCCCCGT CACCGAGTCG CAAGGACGGA TCCACACCTC GGCCGTTGGC
GTGCTGGTGC TGCCCGAGGC TGAAGAGATC GAGGTGGAGA TCAACGAGAG CGATCTGCGC
ATCGATGTCT ACCGTTCCTC GGGCCCCGGC GGGCAGAGCG TGAACACCAC CGACTCCGCG
GTGCGGATCA CCCACCTGCC CACGGGGATC GTGGTGTCCT GCCAGAACGA GAAGAGCCAG
TTGCAGAACA AAGAGCAGGC GCTTCGGGTG CTGCGGGCCC GCCTGCTGGC CGAAGCGCAG
GCCGCGGCCG AAGCAGAGGC CGCCGCGGAA CGGCGCAGCC AGGTCCGCAC CGTGGACCGC
TCCGAGCGGG TGCGCACCTA CAACTTCCCG GAGAACCGCA TCTCCGACCA CCGGGTGGGC
TACAAGGCGT ACAACCTCGA CCAGGTGCTC GACGGGGAGT TGGACGGCGT GATCCAGGCG
CTCGTCGACG CCGACACCAA GGAGCGGTTG GAGGCCGCTC AGCAGTGA
 
Protein sequence
MKLDDLLGEY YELEQQLADP AVHADQAQAR TLAKRYSQLT PIVATYRELN RVESDIETAQ 
ELAAEDPSFA DEAKQLAAQR EELVQRLRTL LIPRDPNDDK DVILEVKAGE GGEESALFAS
DLVRMYLRYA ERQGWKTEII SATHSDLGGY KDITIAIKNR GTVEPGQGVW HRLKFEGGVH
RVQRVPVTES QGRIHTSAVG VLVLPEAEEI EVEINESDLR IDVYRSSGPG GQSVNTTDSA
VRITHLPTGI VVSCQNEKSQ LQNKEQALRV LRARLLAEAQ AAAEAEAAAE RRSQVRTVDR
SERVRTYNFP ENRISDHRVG YKAYNLDQVL DGELDGVIQA LVDADTKERL EAAQQ