| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2339 |
|---|
| Symbol | |
|---|
| ID | 3581259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 2754179 |
|---|
| End bp | 2755228 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637686050 |
|---|
| Product | ABC-type glucosylglycerol transport system permease protein |
|---|
| Protein accession | YP_290395 |
|---|
| Protein GI | 72162738 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.50449 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGT CCCCACAGTC CCCGCCCGCC GAGGAAGAAG GGGGCGGCGG CGTGCGCAAG
CCCTCCTCGC CTCGCGCGGC GCGTGACGAC TACGCCACGC ATGTCCCACC GCTGCGGGCG
AAGGAGAACC CGGCCCACAG CCGCGAGTCG GCCGCGGCCC GCGTGCGGAA ACGCCTGACC
AGCACCGCCG CGAGTGCCAT CGCGATCATC ATCGCTGTCC TGTGGACACT GCCCACCGCC
AGCCTGTTCC TCTCCTCCTT CCGTCCCGAG TTGGAGATCA AGACCACTGG CTGGTGGACG
ATGTTCTCCG ACCCGCAGCT CACCTTGAAC AACTACCGCG AGGTGTTGTT CTCCCCCGGC
CAGGGGCAGC TTGCCAGCTA CTTCGTGAAC TCTTTCGTCA TCACGGTGCC GTCCACGGTA
TTCGTGGTGG TCCTCGCCGC ACTGGCCGCC TACGCCCTGG CCTGGGTCAA CTTCCCCGGC
CGGGACTGGG TGTTCCTGGG GGTCTTCGCC CTGCAGATCG TGCCCCTGCA AATGGCCCTG
GTGCCGTTGC TGCGGTTCTT CTCCCAGGGG GTGACGATCG GCGGATACCA GATCCTGCCC
GCCTGGGATC TGCCGGGCGC GTTCGCGTTC ACCAACGTGT GGGTGGCCCA CACCATCTTC
GGCCTGCCGC TGGGGATCTT CCTGCTGCAC AACTTCATCT CCCAGCTGCC GACCACCCTC
TTTGAGGCGG CCCGGGTGGA CGGCGCCGGA CACGGCGTGC TGTTCCGCAA GGTGGTGCTC
CCGCTCACCG TCCCCGCCCT GGTGTCGCTG GCGATCTTCC AGTTCCTGTG GGTGTGGAAC
GACCTGCTGG TGGCGCTGAT CTTCGCGGGC GGCGACGTGT CCACGGCACC GCTCACGGTC
CGGCTCGCGG AACTGGCGGG CACCCGGGGC AACGAGTGGC AGCGGCTCAC CGCGGGTGCT
TTCGTCTCCA TGGTGATTCC GCTGCTCGTG TTCTTCACTT TGCAGCGCTA CTTCGTCCGC
GGCCTGCTCG CGGGCAGCGT GAAAGGCTGA
|
|---|
| Protein sequence | MSTSPQSPPA EEEGGGGVRK PSSPRAARDD YATHVPPLRA KENPAHSRES AAARVRKRLT
STAASAIAII IAVLWTLPTA SLFLSSFRPE LEIKTTGWWT MFSDPQLTLN NYREVLFSPG
QGQLASYFVN SFVITVPSTV FVVVLAALAA YALAWVNFPG RDWVFLGVFA LQIVPLQMAL
VPLLRFFSQG VTIGGYQILP AWDLPGAFAF TNVWVAHTIF GLPLGIFLLH NFISQLPTTL
FEAARVDGAG HGVLFRKVVL PLTVPALVSL AIFQFLWVWN DLLVALIFAG GDVSTAPLTV
RLAELAGTRG NEWQRLTAGA FVSMVIPLLV FFTLQRYFVR GLLAGSVKG
|
|---|
| |